Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1539g00008 ATGGAGGTACTGGTAATTTCCTCGGATCTTGGTTTACATCCCAAGAACGTACATCACATGATGAGCAAGAATTTCGCCAACTACATTAAAGGGCCCGAGCTTCGTGAGGATTTTGAAGCTTTTGGGGATGGGATTCTCACTACGGATTCAGATGCATGGAAATACCACAGGACACTCCTTCATTCGCTGCTTAAAACCAAGAGTTTTGGGATGATTCTGGAGAAGAATGCTCGAAAGAAGGTGGAAATAGGTAGAAATGCCAAAACTTCAGCTCTCACTTGGTTCTTTTGGTTTGTTGGTAAACACCCTTCAGTAGAAGCTAAGATTCTTGAAGAGATCAAAGAAGAAAAGGAAGAACAATATCAAGTATATCTCCATGGTGCTTTGTGCGAAGCTCTGAGATTGTACCCTCCCGTACCTTTCGAGCGCAATGAAGCAATAAAACACGACGTACTTCCCAGTGGGCATGAGGTTGGTCCTGGTACCAAGATAATGTCATTTTTGTATGCAATGGGAAGAAGTGAAGAGGCATGGGGAAAAGATTGCTTGGAATTCAGACCAGAGAGGTGGATCTCTGAGAGAGGAAGCATCGTTCATATACCGTCATTCAAGTTCGTTAGGTTCAACGCAGGAGCAAGGACTTGTTTGGGTAAGGACTTGTCCTTCATGCAAATGAAGATAGTGGCGAGTTCTATTTTGAGGAATTATCAAGCCCATGTGGTGGAAGATCATCCTATTTCTCCTCCACTTTCTATAATATTCCTAATGAAGTACGGTCTCAAAGTTCGAATCACAGAAAGAGTGATATATTGTTAA 816 0.424 MEVLVISSDLGLHPKNVHHMMSKNFANYIKGPELREDFEAFGDGILTTDSDAWKYHRTLLHSLLKTKSFGMILEKNARKKVEIGRNAKTSALTWFFWFVGKHPSVEAKILEEIKEEKEEQYQVYLHGALCEALRLYPPVPFERNEAIKHDVLPSGHEVGPGTKIMSFLYAMGRSEEAWGKDCLEFRPERWISERGSIVHIPSFKFVRFNAGARTCLGKDLSFMQMKIVASSILRNYQAHVVEDHPISPPLSIIFLMKYGLKVRITERVIYC 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1539g00008 271 Gene3D Cytochrome P450 85 269 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00008 271 PRINTS E-class P450 group I signature 215 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00008 271 PRINTS E-class P450 group I signature 92 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00008 271 PRINTS E-class P450 group I signature 205 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00008 271 PANTHER CYTOCHROME P450 13 82 - -
Pral1539g00008 271 Gene3D Cytochrome P450 10 84 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00008 271 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 208 217 IPR017972 GO:0005506|GO:0016705
Pral1539g00008 271 Pfam Cytochrome P450 89 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00008 271 PRINTS P450 superfamily signature 83 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00008 271 PRINTS P450 superfamily signature 206 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00008 271 PRINTS P450 superfamily signature 215 226 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00008 271 PRINTS P450 superfamily signature 127 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00008 271 SUPERFAMILY Cytochrome P450 13 264 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1539g00008 Pral-Chr1539 55831 57094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1539g00008 10 84 Cytochrome P450 AT2G23180 38.667 2.90e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1539g00008 - - pcin:129305260 272.322