Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1539g00004 ATGTTCCAGTTTAGTGCTATAGTTGCAGGTTTTGCAGCACTTATCTTGTTTCTTTATTATTACAGTCAGAGACGAAGTTGCAGAGACCCTTTGTTCACAGAATGGCCTATATTGGGTATGCTACCACCACTTGTCTGTAATATGTGGCGGTACCATGACTATGTAAAGGAGGCTCTCCGAAGACAAGCAGGTACTGGCAACTTCATCGGACCTTCGTTTGCTAGAATGAATTCAATTATAACCTGCGACCCCATGAATGCACATCATGTTCTGAGCAAGAATTTTGGCAACTACTGTAAGGGGCCTGTGTTTCGTAATATCTTCAAACTCTTTGGAGATAGCATTTTCACTGCAGATTCAGACGCATGGAAACACCAAAGAGCGCTTTACCATTCATTATTTGTCAAAACTAAATGTTTGGAGAAGCTGCTGGAGAGGATCGTTCAAATGAAGGTGGAGACTTGTCTGGTTCCAGTTCTTGATCACGTAGAAAGGCAAACTGTGGACGTGGATCTGCAAGACGTGTTCGATCGCTTAACCTTCGACCTCACTTGCTCCATCCTGTCAGGATCTGACCCTAAAAGCCTTGCCATTGATTTCCCAGAAGTTGAATGCAAGAGAGCTTTTAATAGATTAGAGGAGTTTATATTCTACAGACACGTAGTGCCCGGAAGGATTTGGAAGCTTCAAAGATGGCTGAGAATTGGAGTGGATAAAAAGATGGCCGAACCATTTGAGGCTTTTGATCGGTTCCTCGGTGAAACAATAGCAACAAAGAGAGCAGAGATGAGCCAAAAGAACGAAACAAAGAAACAAGAGAATGACATGCTGAGTTTGATCATGAAGGGAGAAGAACACGTGGATGACAAGTTTTTGAGGGACGCTGGTTTTGGTATTTTTCTTGCAGGCAAAGGCACCATAACTTCAGCCCTAACGTGGTTCTTTTGGCTTGTTGCTGCAAACCCTTCAGTTGAAGCCAAGATTATTCAAGAGATTAAGCAAGTCAAGGAACTGAAAAACCAAGTATATCTCCATGCTGCTCTGTGCGAAGCTGTAAGATTATATCCTCCTGTACCTTATGTGCGCAGGCAAGCAGTCATACGCGGCATGCTTCCCAGTGGACACGACATTAGTCCTCGTACTGCGATAATATTATCTGTGTATGCGATGGGAAGGTGTGAAAAGATATGGGGAAAAGATTGCTTGGAATTCAAGCCTGAGAGATGGATCTCTGAAAGAGGAGGCATCGTCCACATGCCATCGTACAAGTTCATTAGTTTCAACGCGGGACCACGAACTTGCATGGGTAAGGACCTGGCCTTCATTCAAATGAAGATGATAGCTACCGCTATCTTAAAGAATTATCATATTCAAGTGGTGAAAGATCATTCCGTTTCTCCCATGCTTTCGATAGTGCTCCTGATGAAGAATGGTCTCAAAGTTCGACTCACAAAACGAGGCTGA 1464 0.4351 MFQFSAIVAGFAALILFLYYYSQRRSCRDPLFTEWPILGMLPPLVCNMWRYHDYVKEALRRQAGTGNFIGPSFARMNSIITCDPMNAHHVLSKNFGNYCKGPVFRNIFKLFGDSIFTADSDAWKHQRALYHSLFVKTKCLEKLLERIVQMKVETCLVPVLDHVERQTVDVDLQDVFDRLTFDLTCSILSGSDPKSLAIDFPEVECKRAFNRLEEFIFYRHVVPGRIWKLQRWLRIGVDKKMAEPFEAFDRFLGETIATKRAEMSQKNETKKQENDMLSLIMKGEEHVDDKFLRDAGFGIFLAGKGTITSALTWFFWLVAANPSVEAKIIQEIKQVKELKNQVYLHAALCEAVRLYPPVPYVRRQAVIRGMLPSGHDISPRTAIILSVYAMGRCEKIWGKDCLEFKPERWISERGGIVHMPSYKFISFNAGPRTCMGKDLAFIQMKMIATAILKNYHIQVVKDHSVSPMLSIVLLMKNGLKVRLTKRG 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1539g00004 487 CDD CYP86A 68 479 - -
Pral1539g00004 487 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00004 487 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00004 487 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00004 487 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00004 487 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00004 487 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00004 487 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00004 487 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00004 487 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00004 487 Pfam Cytochrome P450 34 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00004 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Pral1539g00004 487 PANTHER CYTOCHROME P450 23 481 - -
Pral1539g00004 487 SUPERFAMILY Cytochrome P450 34 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00004 487 Gene3D Cytochrome P450 29 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1539g00004 Pral-Chr1539 20198 21661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1539g00004 6 486 Cytochrome P450 AT4G39500 43.713 1.89e-145 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1539g00004 - - pcin:129305260 612.453