Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1539g00003 ATGTTGCAGTTGAATACTATAGTAGCAGGTTTTGCAGCAGCAGTTATATTCGTTCTTTATTATTACCGTCAGAGACGAAGTTGTTGCAGAGACCCTTTGTTCACAGAATGGCCTGTACTGGGTATGCTACCACCACTTGTCTGTAATATGTGGCGGTACCATGACTATGTAAACGAGGCTCTCCGAAGACAAGCAGGTACTGGCAACTTCATCGGACCTTCGTTTGCTAGAATGAATTCAATTATAACCTGCGACCCCATGAATGCACATCATGTTCTGAGCAAGAATTTTGGCAACTACTGTAAGGGGCCTGTGTTTCGTAATATCTTCAAACTCTTTGGAGATAGCATTTTCACTGCAGATTCAGACGCATGGAAACACCAAAGAGCGGTTTACCATTCATTATTTGTCAAAACTAAATGTTTGGAGAAGCTGCTGGAGAGGATCGTTCAAATGAAGGTGGAGACTTGTCTGGTTCCAGTTCTTGATCACGTAGAAAGGCAAGCTGTGGACGTGGATCTGCAAGACGTGTTCGATCGCTTAACCTTCGACCTCACTTGCTCCATCCTGTCAGGATCTGACCCTAAAAGCCTTGCCATTGATTTCCCAGAAGTTGAATGCAAGAGAGCTTTTAATAGATTAGAGGAGTTTATATTCTACAGACACGTAGTGCCCGGAAGGATTTGGAAGCTTCAAAGATGGCTGAGAATTGGAGTGGATAAAAAGATGGCCGAACCATTTGAGGCTTTTGATCGGTTCCTCGGTGAAACAATAGCAACAAAGAGAGCAGAGATGAGCCAAAAGAACGAAACAAAGAAACAAGAGAATGACATGCTGAGTTTGATCATGAAGGGAGAAGAACACGTGGATGACAAGTTTTTGAGGGACGCTGGTTTTGGTATTTTTCTTGCAGGCAAAGGCACCATAACTTCAGCCCTAACGTGGTTCTTTTGGCTTGTTGCTGCAAACCCTTCAGTTGAAGCCAAGATTATTCAAGAGATTAAGCAAGTCAAGGAACTGAAAAAACAAGTGTATCTCCATGCTGCTCTGTGCGAAGCTGTAAGATTATATCCTCCTGTACCTTATGTGCGCAGGCAAGCAGTCATACGCGACATGCTTCCCAGTGGACACGACATTAGTCCTCGTACTGCGATAATATTATCTGTGTATGCGATGGGAAGGTGTGAAAAGATATGGGGAAAAGATTGCTTGGAATTCAAGCCTGAGAGATGGATCTCTGAAAGAGGAGGCATCGTCCACATGCCATCGTACAAGTTCATTAGTTTCAACGCGGGACCACGAACTTGCATGGGTAAGGACCTGGCCTTCATTCAAATGAAGATGATAGCTACCGCTATCTTAAAGAATTATCATGTTCGAGCGGTGGAAGGTCATCCCGTCTCTCCCATGCTTTCGATAGTGCTCCTGATGAAGAATGGTCTCAAAGTTCGACTCACAAAACGAGGTTGA 1470 0.4408 MLQLNTIVAGFAAAVIFVLYYYRQRRSCCRDPLFTEWPVLGMLPPLVCNMWRYHDYVNEALRRQAGTGNFIGPSFARMNSIITCDPMNAHHVLSKNFGNYCKGPVFRNIFKLFGDSIFTADSDAWKHQRAVYHSLFVKTKCLEKLLERIVQMKVETCLVPVLDHVERQAVDVDLQDVFDRLTFDLTCSILSGSDPKSLAIDFPEVECKRAFNRLEEFIFYRHVVPGRIWKLQRWLRIGVDKKMAEPFEAFDRFLGETIATKRAEMSQKNETKKQENDMLSLIMKGEEHVDDKFLRDAGFGIFLAGKGTITSALTWFFWLVAANPSVEAKIIQEIKQVKELKKQVYLHAALCEAVRLYPPVPYVRRQAVIRDMLPSGHDISPRTAIILSVYAMGRCEKIWGKDCLEFKPERWISERGGIVHMPSYKFISFNAGPRTCMGKDLAFIQMKMIATAILKNYHVRAVEGHPVSPMLSIVLLMKNGLKVRLTKRG 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1539g00003 489 CDD CYP86A 70 481 - -
Pral1539g00003 489 Pfam Cytochrome P450 37 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00003 489 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00003 489 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00003 489 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00003 489 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00003 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Pral1539g00003 489 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00003 489 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00003 489 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00003 489 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00003 489 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00003 489 PANTHER CYTOCHROME P450 25 483 - -
Pral1539g00003 489 Gene3D Cytochrome P450 31 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1539g00003 489 SUPERFAMILY Cytochrome P450 36 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1539g00003 Pral-Chr1539 13315 14784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1539g00003 33 489 Cytochrome P450 AT2G23180 43.983 3.30e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1539g00003 - - pcin:129305260 607.831