Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1536g00002 ATGGCTCCTAAGCAGCCAAGCACGGGCCTTTTCGTTGGGTTGAACAAGGGCCATGTGGTGACCAAGAAGGAATTGGCTCCACGACCATCAGATCGCAAGGGGAAAACAAGCAAGCGTGTCCATTTCGTGAGGTCAGTGATACGAGAGGTTGCAGGACTTGCTCCATATGAGAAGCGTATTACTGAGCTTCTCAAGGTTGGTAAAGATAAAAGAGCATTGAAGGTGGCCAAGAGAAGGTTAGGCACTCACAAGAGGGCTAAGAAGAAGCGTGAGGAGATGTCCAATGTTCTCCGGAAGATGAGGGCTGGTGGAGGTGGAGAGAAGAAGAAGGCTTAA 336 0.5 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRSVIREVAGLAPYEKRITELLKVGKDKRALKVAKRRLGTHKRAKKKREEMSNVLRKMRAGGGGEKKKA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1536g00002 111 MobiDBLite consensus disorder prediction 1 37 - -
Pral1536g00002 111 MobiDBLite consensus disorder prediction 79 111 - -
Pral1536g00002 111 PANTHER 60S RIBOSOMAL PROTEIN L36 1 107 IPR000509 GO:0003735|GO:0005840|GO:0006412
Pral1536g00002 111 MobiDBLite consensus disorder prediction 87 111 - -
Pral1536g00002 111 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Pral1536g00002 111 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Pral1536g00002 111 Gene3D 60S ribosomal protein L36 1 106 IPR038097 -
Pral1536g00002 111 FunFam 60S ribosomal protein L36 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1536g00002 Pral-Chr1536 4273 6043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1536g00002 1 110 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 80.357 1.23e-57 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1536g00002 K02920 - mnt:21389936 213.001