Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1534g00012 ATGGCTCACATTGCCTCAACTGCTTCAGCCACATTCTTGGCTCTCCAGCGCGGGTCAGTGCAACAGAGTAAAAGTTTCCCGGGCTTTTCCAGAAGTAGGGGAATTCAGTCGTTCTTATTTACAAATTCTCCGAGGAAACGGTTGCAAGTACGATTGTTTTCTTCCGGGACAAATCGCAGCAATGGAGATATTGTGGAGATATCTGAGAGTGAAAAGAAACTGAGGAACTACGTTTGGCCTGATACAAGGAAGCCTAGGGTGTGCATATTGGGTGGTGGATTCGGCGGTTTATATACTGCGTTGAGGTTGGAGTCGCTTGTGTGGTCTGACGACAAAAAGCCGCAGGTTCTTCTTGTTGACCAATGTGAACGTTTTGTTTTCAAGCCGATGTTGTACGAGCTTCTATCTGGAGAAGTGGATGAATGGGAAATAGCTCCCCGATTCTTAGATTTGCTGGCAAACACTAGTGTCCAGTTTTTGCAAGACAGAGTTAAACTTCTGCAGCCCTCTGATCATTTTGGAATGGATGGACAGCCTGCCTCTAGTTGTGGAGGAACCGTGCATCTTGAAAGTGGCCTTTCTATAGAATATGACTGGCTGGTTCTTGCTTTGGGAGCTGAGACTAAACTTGATTTCGTACCAGGAGCAACTGAGTTTGCATTGCCATTCTCCACACTAGAGGATGCAATTAAAGTTAATAATAAGTTAAAAACATTGGAGAGAAAATACTTTGGTAAGGATTCCCAAATCAGTGTGGCAGTTGTTGGCTGTGGTTACTCTGGAGTTGAGTTAGCTGCTACAGTGGCAGAGAGATTAAAGGACAAAGGGATTGTTAGAGCAATCAATGCTGAAAACATGATCTGCCCGAGTGCCCCGCCTGGCAATAGGGAAGCTGCACTGAAAGTTCTTTCATCCAGAAAGGTTGAACTTATATTGGGTTATCTGGTCCGCTGCATTCAGAGGGTGAGTGACTTGGAGTCTTCAGATACCCTGACAGGGGAAGGTGAAAACCAGGGAAATCAATCTGTATATGATTCTGATAAATTTGTTTTGGAGTTGCAACCTACTCAAAGGGGATTAAAAAGGAGAATTCTAGAAGCAGATCTGGTATTGTGGACCGTTGGTTCTAAATCTTCTCTTACTCAGATAGAACCCTCAGATTTATCATCTCCACTTCCTCTCAATGGCCGGGGGCAAGCAGAAACAGATGAAACTCTTCGTGTTAAGGGCCACCCTCGGATATTTGCTCTTGGTGACTCCTCTGCAATAAGAGATTCACGTGGACGGATCCTTCCAGCCACTGCACAGGTTGCATTTCAGCAAGCCGACTTTACTGGTTGGAATCTTTGGGCTGCGATTAATGGCCGTCCACTTTTACCATTTAGGTTTCAGAATTTGGGTGAGATGATGACGCTGGGAAGAAATGATGCTGCCATTTCTCCCAGTTTTATTGAGGGACTGACCTTAGATGGTCAGATTGGTCATACAGCAAGGAAGCTAGCATATTTGTTGAGGTTACCAACAGATGAACATAGGCTTAAAGTAGGGATCAGCTGGTTCACAAAATCTGCCATTGATTCAGTGGCTTCGCTACAGAGCACCTTAACCAAGGTTCTTTCCGGTTCATAG 1629 0.4494 MAHIASTASATFLALQRGSVQQSKSFPGFSRSRGIQSFLFTNSPRKRLQVRLFSSGTNRSNGDIVEISESEKKLRNYVWPDTRKPRVCILGGGFGGLYTALRLESLVWSDDKKPQVLLVDQCERFVFKPMLYELLSGEVDEWEIAPRFLDLLANTSVQFLQDRVKLLQPSDHFGMDGQPASSCGGTVHLESGLSIEYDWLVLALGAETKLDFVPGATEFALPFSTLEDAIKVNNKLKTLERKYFGKDSQISVAVVGCGYSGVELAATVAERLKDKGIVRAINAENMICPSAPPGNREAALKVLSSRKVELILGYLVRCIQRVSDLESSDTLTGEGENQGNQSVYDSDKFVLELQPTQRGLKRRILEADLVLWTVGSKSSLTQIEPSDLSSPLPLNGRGQAETDETLRVKGHPRIFALGDSSAIRDSRGRILPATAQVAFQQADFTGWNLWAAINGRPLLPFRFQNLGEMMTLGRNDAAISPSFIEGLTLDGQIGHTARKLAYLLRLPTDEHRLKVGISWFTKSAIDSVASLQSTLTKVLSGS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1534g00012 542 FunFam Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial 82 515 - -
Pral1534g00012 542 PRINTS Pyridine nucleotide disulphide reductase class-I signature 414 421 - -
Pral1534g00012 542 PRINTS Pyridine nucleotide disulphide reductase class-I signature 251 276 - -
Pral1534g00012 542 PRINTS Pyridine nucleotide disulphide reductase class-I signature 86 108 - -
Pral1534g00012 542 PRINTS FAD-dependent pyridine nucleotide reductase signature 367 383 - -
Pral1534g00012 542 PRINTS FAD-dependent pyridine nucleotide reductase signature 197 215 - -
Pral1534g00012 542 PRINTS FAD-dependent pyridine nucleotide reductase signature 87 106 - -
Pral1534g00012 542 PRINTS FAD-dependent pyridine nucleotide reductase signature 251 269 - -
Pral1534g00012 542 SUPERFAMILY FAD/NAD(P)-binding domain 244 456 IPR036188 -
Pral1534g00012 542 PANTHER APOPTOSIS-INDUCING FACTOR 1 19 538 - -
Pral1534g00012 542 Gene3D - 82 514 - -
Pral1534g00012 542 Pfam Pyridine nucleotide-disulphide oxidoreductase 86 442 IPR023753 GO:0016491
Pral1534g00012 542 SUPERFAMILY FAD/NAD(P)-binding domain 84 274 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1534g00012 Pral-Chr1534 109609 114183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1534g00012 60 443 Chloroplast and Mitochondria Gene Families AT4G21490 23.232 4.81e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1534g00012 K17872 - gmx:100795521 832.787