Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1534g00006 ATGAATGGTGAATTGGAGTTACCGCCTGGGTTCAGATTCCACCCAACGGACGAGGAGCTGGTGAATCACTATCTCTGTAGGAAATGTGCCGCTCAGTCCATTGCTGTTCCCATTATCAAAGAGATCGATCTCTACAAGTTTGATCCATGGCAACTTCCTGAAATGGCACTTTACGGCGAGAAGGAATGGTACTTCTTTTCACCGAGGGACCGAAAATACCCGAACGGTTCGAGGCCGAACCGGGCGGCTGGGAGTGGGTATTGGAAAGCAACTGGAGCCGACAAGCCGATTGGTAAGCCGAAGCCACTGGGAATTAAAAAGGCACTCGTATTCTACGCGGGTAAGGCCCCCAGTGGCATCAAAACGAATTGGATCATGCATGAATATCGCCTCGCTAACGTCGACAGATCCGCCGGCAAGAAAAAGAACCTAAGGCTTGATGATTGGGTGTTATGCCGAATTTACAACAAGAAAGGCACGATTGAGAAATACAATGTGATGGATCAGAAAGCGGGCAATTTATCGGAATTCCATGACCATGAGACCAAACCGGAAATCAAACCGTACGACCACAGTAAGGTGCAGGCACCGGCGGCAACAACGGCGTTCATAGGTGACCAATTCTATATGGACACGTCAGACTCGGTGCCGAGGCTGCACACGGACTCGAGCTGCTCGGAGCACGTGGTTTCGCCGGACGTCACGTGCGAGAAGGAGGTACAGAGCGAGGCCAAGTGGAACGAGCTAGGGCTCGGAGAAGATGATGGGATTGATTTTGAATTGAATTACGTGATTAATAATATGAATAACCTCTCGGGAGAAGATCCCTTCGCCTCTTCCGTACAGTACCAATTGAACCAGCTCTCGCCATTGCAGGACATGTTCATGTTTCTGCAGAAGCCATTCTGA 909 0.5006 MNGELELPPGFRFHPTDEELVNHYLCRKCAAQSIAVPIIKEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKPLGIKKALVFYAGKAPSGIKTNWIMHEYRLANVDRSAGKKKNLRLDDWVLCRIYNKKGTIEKYNVMDQKAGNLSEFHDHETKPEIKPYDHSKVQAPAATTAFIGDQFYMDTSDSVPRLHTDSSCSEHVVSPDVTCEKEVQSEAKWNELGLGEDDGIDFELNYVINNMNNLSGEDPFASSVQYQLNQLSPLQDMFMFLQKPF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1534g00006 302 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Pral1534g00006 302 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Pral1534g00006 302 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Pral1534g00006 302 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 215 - -
Pral1534g00006 302 FunFam NAC transcription factor 16 161 - -
Pral1534g00006 302 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1534g00006 Pral-Chr1534 81996 83472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1534g00006 1 302 NAC Transcription Factor Family AT1G01720 63.844 1.04e-128 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1534g00006 NAM 2.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1534g00006 - - gmx:100170751 457.218