Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1533g00002 ATGGCATTTCTTATCTTCTTTGCCTTAACGATCGGTGTTAGAATCAGAGGGGTTTACCCTGGGGGCCCTTGGCAGAGTGCTCATGCTAGCTTCTTCGGTTTCGGTGGAACTGATGCCTCTGGCAATGTGGGTGGAGCTTGTGGATGCCGTAACCTCTGCGGCGAAGGGCACGGCGCGAACATGGCGAAGCTGAGCACCTCACTATTCAACTTTGGGCTGAGCTGCGGAGCCTGCTTCGAGATAAAGTGCGCGAATGACCGACAAAGGTGTCACTCGAGAAGCCTATTCATCTTCTTCACAGCCAACTTCCGCTACGCTCTTTCGAACGACGATAGCGGCCAGCCATCCTCGGCTGAAATCGGGGTCAAAACTGGCAGTCAAACGCAGTATTGGTGGGCACAGTCATGGTCGCTTACGGTCACGGGCAATGACGGACGTACATCCACCTCTTCGATCATCATGCACTGGCAATTCAATCAAACTTTCACTGCGAAGCTCTTCCAGATCTATTTTCCTTTCCTCCCTCTCTCTATCCCTTCTAAGCTTCTACTACTAAAGCAAGGTCAGAGACGTTTTAACAACATTAGAGCATTTATGGTAGCAGAAAGTGCTCGCATTCGACCAAGTCGCATCCGTCGTGATTGGCAAGGCCATCAGGAATAG 663 0.5113 MAFLIFFALTIGVRIRGVYPGGPWQSAHASFFGFGGTDASGNVGGACGCRNLCGEGHGANMAKLSTSLFNFGLSCGACFEIKCANDRQRCHSRSLFIFFTANFRYALSNDDSGQPSSAEIGVKTGSQTQYWWAQSWSLTVTGNDGRTSTSSIIMHWQFNQTFTAKLFQIYFPFLPLSIPSKLLLLKQGQRRFNNIRAFMVAESARIRPSRIRRDWQGHQE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1533g00002 220 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 108 IPR007112 -
Pral1533g00002 220 PANTHER EXPANSIN-A15 5 101 IPR002963 GO:0009664
Pral1533g00002 220 Gene3D - 16 114 IPR036908 -
Pral1533g00002 220 PRINTS Expansin/Lol pI family signature 23 38 IPR007118 GO:0005576
Pral1533g00002 220 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Pral1533g00002 220 PRINTS Expansin/Lol pI family signature 43 61 IPR007118 GO:0005576
Pral1533g00002 220 SMART dpbb_1 61 130 IPR007112 -
Pral1533g00002 220 SUPERFAMILY Barwin-like endoglucanases 23 88 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1533g00002 Pral-Chr1533 23880 25534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1533g00002 4 101 Expansin Gene Family AT2G39700 59.184 2.61e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1533g00002 - - nnu:104597175 139.428