Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1529g00002 ATGGCTTCCAGTCGCCCTTCATCTGATGCCTCTGCAAAAGAACGCCTTCGTTGGACTCATCAACTTCATGATCTCTTCGTTCAAGCTGTCAACAGACTTGGTGGCCCTGATAGAGCAACGCCAAAGAGTATAGTGAAGGAGATGACGAGCATGGGAGCATCTGGAATCACCATTTATCACGTCAAAAGCCACTTACAGAAATACAGGATCAACAAGTTGATTCCAGAGTCTGCTACTAGAAGTAAGCTTGAGAGAAGAAGCATATCGGACATACTGCCTAATTTCAGCGCATTAGCGACGGTGCAGCTAAAAGAAGCTCTACACTTGCAAATGGAAGTACAAAAACGCTTGAGCGACCAGCTGGAGTTTCAAAGGAGCTTGAAGCTGAAAATGGAAGCTCAAGGGAGGTACCTGGAGAGACTGGGCCAAGCTTATCAGAACTCAACCATCTCCAGAAAATCTGCCGGCAATAATAATAAGCTTCATAGAAATAATACTGCACCTACGACGACATCAATGCCTTGTCTCTCTGAGGAATCCGATGATGATGAACCCGCTAGCTATGGTTCCGAACACAGTAATAGGTCCAACGTTGTCACACACAAAAAGCAGAGAGTCGTCGAGGATGATGATGATGATACTATTAGGGTTAATTTCCCAGCAAGTTTGGACCTTTTTGTTTCCTCTTCTTCTTCTTCTTCGTCGTCATCACTCACTCCAGAATTCTGCAACCAAAACTGGGACCTACTTCCTTGGAATCAGCTTGCAGCTTCATTTCATCAATGTCAATCACCTTTGGTTCCGAGCTTCCTGCTGTGA 819 0.4505 MASSRPSSDASAKERLRWTHQLHDLFVQAVNRLGGPDRATPKSIVKEMTSMGASGITIYHVKSHLQKYRINKLIPESATRSKLERRSISDILPNFSALATVQLKEALHLQMEVQKRLSDQLEFQRSLKLKMEAQGRYLERLGQAYQNSTISRKSAGNNNKLHRNNTAPTTTSMPCLSEESDDDEPASYGSEHSNRSNVVTHKKQRVVEDDDDDTIRVNFPASLDLFVSSSSSSSSSSLTPEFCNQNWDLLPWNQLAASFHQCQSPLVPSFLL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1529g00002 272 MobiDBLite consensus disorder prediction 149 176 - -
Pral1529g00002 272 MobiDBLite consensus disorder prediction 149 209 - -
Pral1529g00002 272 Pfam Myb-like DNA-binding domain 16 69 IPR001005 -
Pral1529g00002 272 FunFam Two-component response regulator 9 73 - -
Pral1529g00002 272 SUPERFAMILY Homeodomain-like 12 70 IPR009057 -
Pral1529g00002 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 73 IPR017930 -
Pral1529g00002 272 NCBIfam myb-like DNA-binding domain, SHAQKYF class 13 71 IPR006447 GO:0003677
Pral1529g00002 272 Pfam MYB-CC type transfactor, LHEQLE motif 101 141 IPR025756 -
Pral1529g00002 272 Gene3D - 12 73 - -
Pral1529g00002 272 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 10 236 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1529g00002 Pral-Chr1529 8111 10544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1529g00002 2 146 G2-like Transcription Factor Family AT3G04450 46.980 1.32e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral1529g00002 Myb_DNA-binding 4.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1529g00002 - - psat:127127459 248.054