Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1528g00010 ATGGCTACTTGGGAAGGAAAGAATGGAAAGAAGACCAGATTAGCTGGAGGCACTTCAAATCGAGCTGTTTGTCAGGTGGAAGACTGTGGCGCAGATCTAAGCAGTGCTAAGGATTATCATAGGCGCCATAAAGTTTGTGAGATGCACTCAAAGGCCAGTAGGGCGCTTGTGGGGAATGTGATGCAGCGGTTCTGTCAGCAATGTAGTCGGTTTCACATCCTTCAGGAGTTTGATGAAGGAAAGAGAAGTTGTCGAAGACGCTTGGCAGGCCACAATAAAAGGAGGAGAAAAACAAATAATGATGCTGTTCCGAATGGCAGTTCAATAAATGATGATCAGACAAGCAGTTGCATGTTGCTTACACTGTTGAAGATACTTTCAAATGTGCATTCTAACAGGTCAAATCAGACCACAGATCAGAATCTGCTATCTCATCTTGTAAAGAGCCTAGCTAGTCAAAATGGTGAACATGGGGCCAGGAGCTTGTCTAACCTTTTGCGGGAACCGGAAAATATGTTGAAAGAGGGGAGTTCTCCTGGTAAGTCCGACGTGGTTTCTGCTTTATTCTCAAATGGTTCTCAAGTCTCTCCAACTGTGATAAGACAACCGCAAACAATATCTATGACTGAAATTCAACATCAAGGGATGCGTGATGCCGGGGCTGCTGATCAACAGACCATGTCTTCTACTAAACCTAGCATTACAAACAGTCCTCCAGTTTACTCAGAAGCCAGGGATAGTGTTGCTGGACAGGCTAAGATGAATAATTTTGATTTGAATGACACATATATTGACTCAGATGATGGCATAGAAGATATTGAAAGATTGCCTGTCTCTGCAAACCTTGGGGCTAGTTCCCTTGATTACCAGTGGGTGCAACAAGACTCTCATCAATCAAGCCCACCTCAGACAAGTGGAAATTCAGATTCTGCATCTGCGCAGTCCCCTTCTAGTTCAAGTGGAGAAGCTCAGAGCCGCACAGATCGAATTGTTTTTAAGCTCTTTGGTAAAGAACCAAATGATTTTCCTCTTGTACTTAGAGCACAGATTCTTGACTGGTTATCCCACAGTCCTACTGACATTGAGAGCTACATACGGCCTGGATGTATTGTTTTCACTATTTATCTGCGTCAGACGGAGGCTGTATGGGAGGAGCTTTGCTATGATCTTACTTCGAGTTTGAATAGGCTTATTGATGTCTCAGAGGGTGACTTTTGGAGAACTGGATGGGTTTACACAAGAGTGAAGCATCAGATAGCCTTCATTTTCAATGGTCAGGTTGTCATAGATAAATCCTTACCTTTGAGAAGTAAAAATTACAGTAAAATTCTGAGTGTTAGTCCGATTGCTGTACCAGCATTCAAAACAGCTCAATTTTCAGTGAAGGGCATTAATCTGATTCGCCCAGCTACTAGGTTATTATGTGCTCTTGAAGGGAAATATATGGTCTGTGAAGATGCTCAGGACCAAATGGAGCAGTGCGCCAAAGAGCTTGATGAGCTCCAGTGCGTCCAATTTTCATGTTCTGTTCCTGTGATGAATGGAAGGGGATTTATTGAGATTGACGACCAGGGCTTGAGCAGCAGCTTTTTTCCTTTCATAGTTACTGAAGAGGATGTTTGCTCAGAAATCTGTGCGCTTGAGCCTCTACTAGAATCAGCCAAAGCTGATTCTGATATCGGAGGATCTGGAAAATTTATGGCCACAAGCCAAGCCATGGATTTTATCCATGAAATGGGCTGGCTTCTCCACAGGAGCCAATTGAGATCTAAGCTGGTTCACCTGAACTCTGATTTAGATCTTTTTCCATTAAAACGGTTCAAGCAGCTCATGGAGTACTCTATGGACCATGATTGGTGTGCAGTGGTGAAGAAACTATTGAACCTATTACTTGGTGGCACAGTGGATGCAGGTGATCACCCATCGCTATATTTGGCACTTTCAGAGATGGGTCTCCTTCATAAAGCTGTAAGGAGGAATAGCAGGCAGTTGGTGGAGTTGCTTTTGAGATATGTCCCCGATATGATTTCTGATAAACGAGGACCTGAAAACGAGGCACTAGCTGATGTTGGGAACCAGAGCTTCTTGTTTAGACCTGACATTGTTGGTCCTGCGGGCTTGACACCACTTCATATTGCAGCTGGGAAGGATGGTTCTGAGGATGTATTGGATGCTTTAACTAATGATCCTTGCATGGTAGGAATTGAAGCATGGAAGAGTTCACGTGACAGTACAGGCTTTACACCTGAAGATTATGCACGCTTACGTGGTCATTATGCATACATTCACTTGGTTCAGAAGAAAATCAACAAGAGACAAGCAGCAGCAGCATCTCATGTGTTGGTGGATATCCCTAGCAATCTGACTGAGTCTAGTATACATCAGAAGCAAACCGAATCTTCCACTAGCTTTGAGATCGTAAAGGCAGAAGGAAGCCGTGTGCACGGCCATTGCAGACTTTGCGACCATAAGTTCTCTTGTAGGACTGCAGTTGGAAGGTCTTTAGTGTACAAACCTGCCATGCTCTCAATGGTGTGTGTAGCGGCAGTGTGTGTCTGCGTGGCCCTCCTGTTCAAAAGCTCACCTGAAGTTCTGTATGTGTTCCAACCCTTCACGTGGGAGTCGCTGAATTTCGGAACAAGCTGA 2646 0.4429 MATWEGKNGKKTRLAGGTSNRAVCQVEDCGADLSSAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHILQEFDEGKRSCRRRLAGHNKRRRKTNNDAVPNGSSINDDQTSSCMLLTLLKILSNVHSNRSNQTTDQNLLSHLVKSLASQNGEHGARSLSNLLREPENMLKEGSSPGKSDVVSALFSNGSQVSPTVIRQPQTISMTEIQHQGMRDAGAADQQTMSSTKPSITNSPPVYSEARDSVAGQAKMNNFDLNDTYIDSDDGIEDIERLPVSANLGASSLDYQWVQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPTDIESYIRPGCIVFTIYLRQTEAVWEELCYDLTSSLNRLIDVSEGDFWRTGWVYTRVKHQIAFIFNGQVVIDKSLPLRSKNYSKILSVSPIAVPAFKTAQFSVKGINLIRPATRLLCALEGKYMVCEDAQDQMEQCAKELDELQCVQFSCSVPVMNGRGFIEIDDQGLSSSFFPFIVTEEDVCSEICALEPLLESAKADSDIGGSGKFMATSQAMDFIHEMGWLLHRSQLRSKLVHLNSDLDLFPLKRFKQLMEYSMDHDWCAVVKKLLNLLLGGTVDAGDHPSLYLALSEMGLLHKAVRRNSRQLVELLLRYVPDMISDKRGPENEALADVGNQSFLFRPDIVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKSSRDSTGFTPEDYARLRGHYAYIHLVQKKINKRQAAAASHVLVDIPSNLTESSIHQKQTESSTSFEIVKAEGSRVHGHCRLCDHKFSCRTAVGRSLVYKPAMLSMVCVAAVCVCVALLFKSSPEVLYVFQPFTWESLNFGTS 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1528g00010 881 MobiDBLite consensus disorder prediction 89 110 - -
Pral1528g00010 881 SUPERFAMILY Ankyrin repeat 647 765 IPR036770 -
Pral1528g00010 881 FunFam Squamosa promoter-binding-like protein 14 15 85 - -
Pral1528g00010 881 MobiDBLite consensus disorder prediction 292 325 - -
Pral1528g00010 881 Gene3D - 598 776 IPR036770 -
Pral1528g00010 881 Pfam SBP domain 24 97 IPR004333 GO:0003677
Pral1528g00010 881 SUPERFAMILY SBT domain 22 102 IPR036893 GO:0003677|GO:0005634
Pral1528g00010 881 MobiDBLite consensus disorder prediction 219 242 - -
Pral1528g00010 881 MobiDBLite consensus disorder prediction 214 246 - -
Pral1528g00010 881 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 9 764 IPR044817 GO:0003677
Pral1528g00010 881 Coils Coil 484 504 - -
Pral1528g00010 881 ProSiteProfiles Zinc finger SBP-type profile. 21 98 IPR004333 GO:0003677
Pral1528g00010 881 Gene3D - 15 85 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1528g00010 Pral-Chr1528 62673 69398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1528g00010 5 881 SBP-box Gene Family AT3G60030 58.625 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pral1528g00010 SBP 1.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1528g00010 - - gmx:100809806 1389.02