Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1528g00008 ATGTTGTTATGGGCGGTAGACAACCCTGCTCCCGCAAATTATTTGCTAATTTCTGGAGACAGGGATTTCTCTAATGCTCTGCATCAGTTGCGCCTGAGAAAATACAACATTCTTCTAGCACAACCACCGAAAGCATCAGCTCCTCTAGTTGCAGCAGCAAAATGTGTTTGGCTCTGGACGAGCCTTTTATCTGGAGGAGCCCCACTATCAAGTGGCGAATCATCCTGCCTTGCAAGCGGTAACTATGTCTCTCATTTTGAGAGGATGGAAAACCCGGTTGTTGAGCCAAATCAAATGAGTCAGCCACTGGTTCTCAATTCTGAAAACCTTGACATGGGCAGTCAAAATAACCGTACTACTAGAAGCGTTGGTGATTTGAAACACAAAGTAAAATATGTTTTGAAAGCTGACAATCAACCCAATCTATCAAGCTCTTCAAGCTTACCTGTTACAGTTTCAGAGGGTAAGAACAATGATCCTCTTAAACTAGCACAGTCACCGGTGAAGCTGTTCCGAAAAGCTCCACACGAATTCTTTGTTAGTAGCAATCCCGTAGTCCCAAACGGTAGGTTTACTCCTAACTTTCCAAGCAACCAAGATGGCTCAGAAAATAAAAGGAGCAACTCTAATGAAATTTCCCAGGATCTCTATCATGGTTCTTTGAGGTCAAACAACCTTCATATACAACCCGTGTCTGGACCGAATTTGCCTCTTCCTGACTCCCATGCTCGAACATTTCAACCCGTTCCTTCTTATTCAGCTGGATCTAAATTGTCTACGGCCCCAAATTCATTTCATGATATACCTAAGCCACATGATTCTCCATATCCTAACAATGTCAAAAGTACTCTTTCTCATCAGCGAACCAGAGAAGATTCTAATCCAAGCACTACTCAATCTCCTAATCTACATAGCTTCCATGCACCCCCAGCAGGCTACGACCCACCATGTGTCCAAGCATTTCATTGTGAGAATTTGAACCTGAGGCATCCTCGTGGTTCCAAACATATGCCTACTCCCTCCGTCACTGGAATTGCCAATACCAGTTCTAAGAATATTACCTTGGGAGTTGAGGGATTTCCACCACCTTCTGAGTATGAGCGAGGCCTCGTGGGTGCTATTCTACTAGCCTTAAACACTCTGAAGGTTGAAAAGATTATGCCAACTGAAGCAAATATAACTGATTGCATTTCGTATGGAGATTCGAAATATCGAACCACTGATGTCAAGAAGGCTTTAGATTGTGCAATCAAGCTAAATGCGGTAATAAAACAGAGACTAGGTGCATTAAATTTTTATGTTGGTAGAAACGAGAAACTATGGAATTGTGTAAACATTATATGTGGAAATGTTAGTCAGTATCCAAATACAACGTGGGATCGAATACAAGAGTTCCTTGCTTCATCATCTGGACGATCAGCAATGTTGTCTTCCCAGTGCAGATATGAAGCATCTTTAATTCTAAGGAAAGAATGCCTTAAAGAGCTTATGTTAGGAGAGGTACTTCAGATCTTGAATATGATCATCACTGTCAAGAAATGGATTATAATTCATCGGTCTGGATGGCAGCCGATAACTATTACGCTTAATGAGAGTGGAGATGATACAGGAAGTGTTCCAGAGTTAAAGTAA 1632 0.4185 MLLWAVDNPAPANYLLISGDRDFSNALHQLRLRKYNILLAQPPKASAPLVAAAKCVWLWTSLLSGGAPLSSGESSCLASGNYVSHFERMENPVVEPNQMSQPLVLNSENLDMGSQNNRTTRSVGDLKHKVKYVLKADNQPNLSSSSSLPVTVSEGKNNDPLKLAQSPVKLFRKAPHEFFVSSNPVVPNGRFTPNFPSNQDGSENKRSNSNEISQDLYHGSLRSNNLHIQPVSGPNLPLPDSHARTFQPVPSYSAGSKLSTAPNSFHDIPKPHDSPYPNNVKSTLSHQRTREDSNPSTTQSPNLHSFHAPPAGYDPPCVQAFHCENLNLRHPRGSKHMPTPSVTGIANTSSKNITLGVEGFPPPSEYERGLVGAILLALNTLKVEKIMPTEANITDCISYGDSKYRTTDVKKALDCAIKLNAVIKQRLGALNFYVGRNEKLWNCVNIICGNVSQYPNTTWDRIQEFLASSSGRSAMLSSQCRYEASLILRKECLKELMLGEVLQILNMIITVKKWIIIHRSGWQPITITLNESGDDTGSVPELK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1528g00008 543 PANTHER LIMKAIN B LKAP 1 413 IPR024768 GO:0005777|GO:0010468
Pral1528g00008 543 Pfam NYN domain 1 53 IPR021139 GO:0004540
Pral1528g00008 543 MobiDBLite consensus disorder prediction 224 309 - -
Pral1528g00008 543 MobiDBLite consensus disorder prediction 137 160 - -
Pral1528g00008 543 MobiDBLite consensus disorder prediction 137 161 - -
Pral1528g00008 543 MobiDBLite consensus disorder prediction 182 210 - -
Pral1528g00008 543 MobiDBLite consensus disorder prediction 185 210 - -
Pral1528g00008 543 MobiDBLite consensus disorder prediction 276 305 - -
Pral1528g00008 543 MobiDBLite consensus disorder prediction 246 263 - -
Pral1528g00008 543 Pfam OST-HTH Associated domain 478 531 IPR025677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1528g00008 Pral-Chr1528 49135 60485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1528g00008 1 102 C2H2 Transcription Factor Family AT5G61190 70.192 9.91e-36 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1528g00008 - - pcin:129310578 816.609