Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1528g00003 ATGGAAGATGAATCTTTTCTTTCCTTGCAAACAAGGACCCAATTTGAACCCATCACCGAGCATCGAGTTCCTGATTTATCCCTTGCTAGCTCTTATTCCTTCAACGAATTTATCGCTTTACAGGAACCCCAGCGAGACCCACAAGCCTCATCTCAATTATTGACTCAGAATGCGCCCAAGAAGAAACTTACTCGCTGCAAGACTGCTCCTGCCATGGTTGTTTTTAAGGATTTCAGACGAAAATTATCCGATGTTCCTAAACCCCAGTCTAGCTCAATCATCAGGCAAGGCGTTTGCTTGCTTGTGATATATCTTTCAGTCGGGGTTGTCATATACTCCTTCAATCGGGACCATTTTTCTGGCGCAGAGACTCACCCAGTTGTTGATGCGCTTTACTTTTGTATAGTCACCATGTGCACAATCGGTTACGGAGACATCACACCGACAACCTCAGTAACCAAGGTCTTTGCCTGTTTCTTTGTATTGGTAGGTTTTGGCTTCATTGACATATTGCTTAGCGGGCTTGTTCATTACGTGCTAGATTTGCAAGAGAACACGATTCTAACTGGGCTTGTAATGGGTGCTCAAACTCAAAGATCTCACGAAGGGTTCTCTGCAAGAAATTACATAGTTGATGTGGCAAAGGGGCGGATGAGAATCAGATTGAAGGTTGGTTTGGCTCTGGGCGTGGTGGTGTTGTGTATTGGAATAGGGAGTCTGGTTCTGTACTTTGTGGAGGACTTGAATTGGATTGATTCAATTTACTTATCCGTTATGTCTGTAACAACAGTGGGGTATGGGGACAGAGCCTTCAAGACCCTTCCCGGCAGGCTCTTTGCTGCTATCTGGCTCCTCGTTTCCACACTGATGGTGGCCCGGGCCTTCCTGTATTTGGCAGAGGCCAGAATTGATAGAAGGCACCGGAGAATAGCCAAGTCGGCGTTGCATAGAGATATGACTGTTGAAGATTTGCTGGCTGCCACCATCAATAACACTGGCTTTATTAGTAAGTCAGAGTATGTAATATTCAAGCTCAAAGAGATGGGGAAGATAAGGGAAAAGGATATATTGCAAATCTGTGACCAGTTCAACAAGCTTGATTCCACTAATTCTGGAAAGATAACGCTGCCTCATCTCCTAGAGGGTCGGTCATGA 1155 0.4511 MEDESFLSLQTRTQFEPITEHRVPDLSLASSYSFNEFIALQEPQRDPQASSQLLTQNAPKKKLTRCKTAPAMVVFKDFRRKLSDVPKPQSSSIIRQGVCLLVIYLSVGVVIYSFNRDHFSGAETHPVVDALYFCIVTMCTIGYGDITPTTSVTKVFACFFVLVGFGFIDILLSGLVHYVLDLQENTILTGLVMGAQTQRSHEGFSARNYIVDVAKGRMRIRLKVGLALGVVVLCIGIGSLVLYFVEDLNWIDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLVSTLMVARAFLYLAEARIDRRHRRIAKSALHRDMTVEDLLAATINNTGFISKSEYVIFKLKEMGKIREKDILQICDQFNKLDSTNSGKITLPHLLEGRS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1528g00003 384 SUPERFAMILY Voltage-gated potassium channels 215 324 - -
Pral1528g00003 384 SUPERFAMILY Voltage-gated potassium channels 73 183 - -
Pral1528g00003 384 FunFam Two-pore potassium channel 3 207 321 - -
Pral1528g00003 384 Pfam Ion channel 100 178 IPR013099 -
Pral1528g00003 384 Pfam Ion channel 232 300 IPR013099 -
Pral1528g00003 384 PRINTS Two pore domain K+ channel signature 262 271 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral1528g00003 384 PRINTS Two pore domain K+ channel signature 136 164 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral1528g00003 384 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 126 358 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral1528g00003 384 Gene3D - 206 329 - -
Pral1528g00003 384 Gene3D - 71 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1528g00003 Pral-Chr1528 29308 31301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1528g00003 41 380 Ion Channels AT4G01840 65.598 2.98e-156 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1528g00003 K05389 - gmx:100801488 528.865