Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1527g00004 ATGGATATGGACATTCCACTTCCAGAAGAGCTGGAATTGCTGGAGTCCAATGCGCGTCTTCTCGAAGACTACCCAGACCTGGAGCCACCGAAACCCTGCCCTTACGAAGACGAAGAAGCGCCACCACCAGCACAACCACCATCATCCCCAGATCTTCAATTCGACTCTGAAATTCAAGTCATTGGCCATAAGCGATCGAGGTCGGTTAGTCCGAATGGATCGCTTTCAGAGGCTGTGGAGCTGTCAGTGGAGAAAAGGTGCAGGACTGACGAGTCGGCGCGGGCATCTGATGAGGACTGGCTTCGTTACTCGCCACCCAAGGGTAGCGAGTCTGCAGTGGCTGAGCAAGCGAGCTTTGTGAAGGAGAAGATGTTATCCAGGTATGCGTCGGAAATCGATGGAGAGTGTATGCCGATCACTGCACCCAACGGCGACAGGGTTTATGCGCGATTAGACAGGTTGGAAGGGGAGGAACGGTTGAAGAAACTGGATGTGAGAGCAAATACTGATGGTCTTATATTAGAACCCATTGGTATTCTATTTGAGAAATTGGATCAAGAGGCTTTCACTAAGACATTGAAGGCTAGTTCTGAATGTCAAAATGTTCCGGATGTTCCTGAAACACCAATTGTCCATGAGCAACTTTGGGTAGATAAATATACCCCAAATTCATTCACTGAGCTTCTTAGTGATGAACATACAAATCGTGAGGTACTTCTGTGGTTGAAGCAGTGGGATTCTAGTGTATTTGGATCCGAGATTTGCAGTACATCAGATGAAGTTTTTTCTGCTTTGAAACGACATTCTACTGTTGTCCAAAATCAGAAACCTTTAGATTCAAAATTTCAAAGAATGGGTGGAGGCCCAAAATGGAGTAACAAGAGATATAAAAATTCTAAAAGTATGGAAGAAAGTGGTAATTCAAAGAGTGTTCAGGATATGTTGAATAGGAAAGCAAAGCATACTGGTCCACCAGAGCAGAAGATCCTTTTGCTTTGCGGTCCTCCGGGTCTTGGAAAAACTACACTTGCACATGTAGCTGCCAGACATTGTGGATATCATGTGGTGGAGGTTAATGCTAGCGATGATCGAAGTACATCAACAATTGAATCAAAGATCCTTGATGTGGTTCAGATGAACTCTGTCATGTCTGATTCAAGACCAAAATGCCTGGTGGTGGATGAAATTGATGGGGCACTTTCAGATGGAAAGGGTGCTGTGGAGGTTCTTTTAAAGATGGTTTCTGTTGAAAAGAAGCCTGATGCGGGAAGGGAAAATTTGGTGAAAGAGCAAACAGGAAGGAGATCCTGGAAGAAGGGACATAAGAAAGCATCACTTTCAAGACCGGTAATTTGCATTTGCAATGACCTATATGCCCCTGCCTTGAGACCATTGCGTCAGGTAGCAAAGGTTCACATTTTTGTTCAACCAACAGTTAGTCGCGTGGTAAGCAGGCTTAAATATATATGTAACAAGGAGGGGATGAAAGCTAATGCCATCGCACTTACTGCCCTAGCAGAATATACAGAATGTGATATACGCTCATGCTTAAATACGCTCCAATTTCTCAGCAAGAAGAAAGAAGCCCTCAATGTGTTTGATATTGGTTCTCAAGTGGTTGGCCGGAAAGACATGTCAAAGAATGTTCTGGACATTTGGAAGGAGGTTTTTCAAAGAAAAAAACCAAGACAGAAAGAAAATCTCACAATAGCATGCTTTTTGAAGTCAACTCCTTGTACTCCCCTTGTATCAAGCCGTGGTGATTATGATTTGATTCTTGATGGAATTCATGAAAACATTTTACATCTCAATTATCATGACCCAGTGATGCAGAAGACTGTCAAGTGCTTGAATAGTCTTGATTCTGATCTACTGCATCAATATATCATGCGTACACAACAAATGCCGCTTCAGGTTTATTTGCCACCTGTAGCAATTACTGTACATCGACTGGTAGCTCAAATTCAGAAGCCGAACATTGAATGGCCAAGGTCCTATCAAAGGTATCGAGCAATGATGGCGGAAAAAATGGATATTTTGAATACTTGGCACTACAAAATTCCGCCATATATTGCTAGGCACTTTTCAGCTAGTACGCTTGTAGAAGACTTAATTTCTCCATTATTACATATTCTGTCCCCTCCGACTATAAAACCGGTTGCGTTACAATTACTGTCTGATAAAGAGAAAAATGACCTTGCTCAATTAGTTAGCACAATGTTATCTTACTCTGTAACATATAAAAACATGAAATCAGATATGCTGTCGAATAGTCTGAGACATGAAGTAGCAGATCACTTAACACTATCATTTGATCCCCCAATCTGCGACTTTGTCAATTTTAAGGATTATACCTCAAGCCATTATGTGCTTGCTCTAGCTGTCAAGCAGATTCTTGTGCATGAGGTTGAAAAGCAAAAGATCTTGCGAGTTAATATTGATAGGCCTTTAGGAAATGGAAGTAGCAGTGGAAGGCCTGAATTCATTGAGGCTGGCACTAGCAATGCCCAATCATCCAATCAGATCATTCATGCAGATGCAATTCTGCTAAAAACATTCAAAGCGAAAGTAATGTCATAA 2580 0.4217 MDMDIPLPEELELLESNARLLEDYPDLEPPKPCPYEDEEAPPPAQPPSSPDLQFDSEIQVIGHKRSRSVSPNGSLSEAVELSVEKRCRTDESARASDEDWLRYSPPKGSESAVAEQASFVKEKMLSRYASEIDGECMPITAPNGDRVYARLDRLEGEERLKKLDVRANTDGLILEPIGILFEKLDQEAFTKTLKASSECQNVPDVPETPIVHEQLWVDKYTPNSFTELLSDEHTNREVLLWLKQWDSSVFGSEICSTSDEVFSALKRHSTVVQNQKPLDSKFQRMGGGPKWSNKRYKNSKSMEESGNSKSVQDMLNRKAKHTGPPEQKILLLCGPPGLGKTTLAHVAARHCGYHVVEVNASDDRSTSTIESKILDVVQMNSVMSDSRPKCLVVDEIDGALSDGKGAVEVLLKMVSVEKKPDAGRENLVKEQTGRRSWKKGHKKASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTVSRVVSRLKYICNKEGMKANAIALTALAEYTECDIRSCLNTLQFLSKKKEALNVFDIGSQVVGRKDMSKNVLDIWKEVFQRKKPRQKENLTIACFLKSTPCTPLVSSRGDYDLILDGIHENILHLNYHDPVMQKTVKCLNSLGXSDLLHQYIMRTQQMPLQVYLPPVAITVHRLVAQIQKPNIEWPRSYQRYRAMMAEKMDILNTWHYKIPPYIARHFSASTLVEDLISPLLHILSPPTIKPVALQLLSDKEKNDLAQLVSTMLSYSVTYKNMKSDMLSNSLRHEVADHLTLSFDPPICDFVNFKDYTSSHYVLALAVKQILVHEVEKQKILRVNIDRPLGNGSSSGRPEFIEAGTSNAQSSNQIIHADAILLKTFKAKVMS 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1527g00004 860 MobiDBLite consensus disorder prediction 15 35 - -
Pral1527g00004 860 Gene3D - 213 475 IPR027417 -
Pral1527g00004 860 Gene3D - 477 548 - -
Pral1527g00004 860 SMART AAA_5 326 480 IPR003593 GO:0016887
Pral1527g00004 860 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 818 - -
Pral1527g00004 860 MobiDBLite consensus disorder prediction 1 73 - -
Pral1527g00004 860 Pfam ATPase family associated with various cellular activities (AAA) 330 455 IPR003959 GO:0005524|GO:0016887
Pral1527g00004 860 CDD AAA 325 415 - -
Pral1527g00004 860 CDD HLD_clamp_RFC 477 535 - -
Pral1527g00004 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 531 IPR027417 -
Pral1527g00004 860 MobiDBLite consensus disorder prediction 280 316 - -
Pral1527g00004 860 FunFam Chromosome transmission fidelity protein 18 477 544 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1527g00004 327 751 Core DNA Replication Machinery Family AT5G22010 24.342 3.75e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1527g00004 K11269 - gmx:100785041 1115.14