Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1526g00003 ATGGCTTCTAGGAACCAGAACAGGCCACCACGTAGCCCCTCAAATACAGCCCCGTCAGAAAAGCGTAGGAGGGTTGGAGCAGAAAGGATGGATCGGCAGGGAAACACTGGCCGTGGCAGGCAGCCGTTTGCCTCAGTGAACAAAGGGCCAGAAGCTAATAGAGCAAACGATGCTGCCAATAACGAGGGCTCAGAATGTAGCACTGTTGAGTTCACCAAAGAGGATGTGGAGGCATTGTTAAACGAGAAGATTAAAAAGGGAAATCCCTTTGATAATAAGAGAAAAATGGACCAGATGGGAGATTTCATTAGGCGGCTTAGACTGTGTGTAAAATGGTTTCAAAAACTTGAAGAAACTTACATTGAAGAAAAGGAAAAGCTTCAATCTGCCCTTGAATCTGCCGAGAAGAAGTGCAGTGATACTGAGTCTGAAATGAAAAATAAGATCGAGGAGTTAAGCAACACAATATCAGATTTGAAGAAGACAATTTATTCATTGGAAGAGAGAATTTCAAAGGAAGAATCCTTGAAGTTGGAATCGATGGAACGTCATAGAGAAGAAAAGGAAGCCAGAAGTGCTGCAGAGAAGATGCAAGTTTCTCTTTCAACTGAGCTTGAGAAAGTCAAGCAAGAGAAATTAGAGGCTGAGCAAAGGGCCAAATCGAATGAGCTTTTGTACAGTTGTTCAAAAGAGTATAATATGGACCTGCAGCGCTACAATAGTCGACTCCAGTCGGATCTTCAATCGGCTAATGAATCACTTAAAGAACTGGAAAAGGAGAAAACAGCCATTGTTCAAAACCTTAGCGATGTGAGAGGTCACAATAAAATATTGCAGGATCAGCTGGCATCTGTTAAAGCTTCGCGTGATGAGGCTACGAAACAAAAAGATTCACTAGCACACGAGCTCAGTTGTCTCCGTGAAGAATTAAAACAAATTAGAGATGATCGTGATCGGCAACAAGGACAAATACAGGCTTTAACTGGAGAAGTAGCATACTACAAAGAATATACGGGGAATTCATGTGCACAATTGGATAGCTTGACAAGTAAAATAAAGGACCTCGAGGACACATGTTCTTTTCAGAGGGACCAAATAAATAGATTACAACATCAACTGACTGCTGAAAAAGAGAAATTGAAGATGGCCGACCTATCGGCTTTAGAAACAAGAACGAGTTTTGAAGAGCAGCAAAGAATTATCTGTGAACTGCAGGATCGTCTGGCTGATAAAGAATTCCAAGTAATTGAAGGAGAGAAATTAAGGAAAAAGTTGCACAACACTATCCTTGAGCTAAAAGGGAACATTCGTGTGTTTTGTCGAGTTCGACCTTTGCTACCAGAAGACGGTGTCGGAACAAACATGGTTGTTTCCTACCCTGCATCAACAGAAGCTCTTGGCCGAGGCATTGAATTGGTCCAAAACGGGCAAAAGTACCCTTTTACATTTGATAAGGTCTTCAATCATGACGCTTCTCAGCAAGACGTTTTCATTGAGATATCGCAGTTGGTACAAAGTGCGCTTGATGGGTACAAGGTTTGCATATTTGCTTATGGTCAGACAGGTTCAGGCAAAACATACACAATGATGGGTAGGCCTAATGCTCCAGATCTGAAAGGACTGATCCCACGTTCTCTAGAACAGATCTTCCAAACTAGTCAAGCCCTTAAGGACCAGGGTTGGTCATACAAAATGCAGGCTTCAGTACTTGAAATATATAATGAAACAATTCGAGATTTGTTGGCGTCGAATCGGCCAAGCGGAACCGATCTAACTCGAACAGAAAATGGTGTTCCTGGGAAGCACTACACTATTAAACATGACGCGAATGGAAACACAGAAGTTTCCGACCTCACTATTGTAGACGTTTGTAGCGTGAAGGAGATTTCCTCTCTCCTGCAACAGGCTGCAAATTGCAGGTCGGTAGGAAGAACACAGATGAATGAACAATCATCAAGAAGCCATTTTGTTTTTACTTTGCGTATAACTGGGGTTAATGAGAATACTGAACAACAAGTGCACGGCGTCTTGAATCTGATTGATCTAGCTGGAAGCGAAAGACTATCGAAAAGTGGGGCAACTGGGGACCGACTAAAGGAAACTCAGGCTATCAACAAAAGTTTATCGTCTTTGAGTGATGTCATGTTTGCTTTGGCCAAGAAAGATGAGCATATTCCTTTTAGGAACTCTAAACTGACGTATCTTCTTCAGCCATGTCTTGGTGGAGATTCCAAAACGTTGATGTTTGTCAATGTTTCGCCCGACCCTTCTTCGGCTGGGGAGTCCCTTTGTTCTCTCCGTTTTGCTTCCAAAGTGAATGCATGTGAAATTGGTATTCCAAGGCGTCAGACATCGTCCAAGTCCTTTGATTCTCGGATGAGCTATGGGTGA 2391 0.4266 MASRNQNRPPRSPSNTAPSEKRRRVGAERMDRQGNTGRGRQPFASVNKGPEANRANDAANNEGSECSTVEFTKEDVEALLNEKIKKGNPFDNKRKMDQMGDFIRRLRLCVKWFQKLEETYIEEKEKLQSALESAEKKCSDTESEMKNKIEELSNTISDLKKTIYSLEERISKEESLKLESMERHREEKEARSAAEKMQVSLSTELEKVKQEKLEAEQRAKSNELLYSCSKEYNMDLQRYNSRLQSDLQSANESLKELEKEKTAIVQNLSDVRGHNKILQDQLASVKASRDEATKQKDSLAHELSCLREELKQIRDDRDRQQGQIQALTGEVAYYKEYTGNSCAQLDSLTSKIKDLEDTCSFQRDQINRLQHQLTAEKEKLKMADLSALETRTSFEEQQRIICELQDRLADKEFQVIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPEDGVGTNMVVSYPASTEALGRGIELVQNGQKYPFTFDKVFNHDASQQDVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPNAPDLKGLIPRSLEQIFQTSQALKDQGWSYKMQASVLEIYNETIRDLLASNRPSGTDLTRTENGVPGKHYTIKHDANGNTEVSDLTIVDVCSVKEISSLLQQAANCRSVGRTQMNEQSSRSHFVFTLRITGVNENTEQQVHGVLNLIDLAGSERLSKSGATGDRLKETQAINKSLSSLSDVMFALAKKDEHIPFRNSKLTYLLQPCLGGDSKTLMFVNVSPDPSSAGESLCSLRFASKVNACEIGIPRRQTSSKSFDSRMSYG 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1526g00003 796 Coils Coil 275 330 - -
Pral1526g00003 796 FunFam Kinesin-like protein 381 777 - -
Pral1526g00003 796 Pfam Kinesin motor domain 441 773 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral1526g00003 796 SMART kinesin_4 433 783 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral1526g00003 796 PRINTS Kinesin heavy chain signature 676 694 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral1526g00003 796 PRINTS Kinesin heavy chain signature 510 531 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral1526g00003 796 PRINTS Kinesin heavy chain signature 645 662 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral1526g00003 796 PRINTS Kinesin heavy chain signature 725 746 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral1526g00003 796 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 773 IPR027417 -
Pral1526g00003 796 Coils Coil 345 372 - -
Pral1526g00003 796 PANTHER KINESIN-LIKE PROTEIN KLP-3 282 786 IPR027640 GO:0003777|GO:0007018
Pral1526g00003 796 MobiDBLite consensus disorder prediction 17 35 - -
Pral1526g00003 796 ProSiteProfiles Kinesin motor domain profile. 435 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral1526g00003 796 Coils Coil 171 225 - -
Pral1526g00003 796 ProSitePatterns Kinesin motor domain signature. 675 686 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pral1526g00003 796 Coils Coil 113 169 - -
Pral1526g00003 796 MobiDBLite consensus disorder prediction 1 16 - -
Pral1526g00003 796 CDD KISc_C_terminal 433 777 - -
Pral1526g00003 796 Coils Coil 240 267 - -
Pral1526g00003 796 Gene3D - 242 333 - -
Pral1526g00003 796 Gene3D Kinesin motor domain 378 777 IPR036961 -
Pral1526g00003 796 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1526g00003 Pral-Chr1526 26859 32233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1526g00003 396 787 Calmodulin-binding Proteins AT5G65930 38.806 1.04e-77 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1526g00003 K10405 - gmx:100818473 1143.64