Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1526g00001 ATGGCTTCCAATCGCCCTTCCTCATCTGATGCCTCTGCAAAAGAACGCCTTCGTTGGACTCATCAACTTCATGATCTCTTCGTTCAAGCTGTCAACAGACTTGGTGGCCCTGATAGAGCAACGCCAAAGAGTATAGTGAAGGAGATGACGAGCATGGGGGCATCTGGAATCACCATTTATCACGTCAAAAGCCACTTACAGAAATACAGGATCAACAAGTTGATTCCAGAGTCTGCTACTAGAAGCAAGCTTGAGAGAAGAAGCATATCGGACATACTGCCTAATTTCAGCACATTAGCGACGGTGCAGCTAAAGGAAGCTCTACACTTGCAAATGGAAGTACAAAAACGCTTGAGCGACCAGCTGGAGTTTCAAAGGAGCTTGAAGCTGAAAATGGAAGCTCAAGGGAGGTACCTGGAGAGACTGGGCCAAGCTTATCAGAACTCAACCATCTCCAGAAAATCTGCCGGCAATAGTAATAAGCTTCATAGAAATAATACTGCACCTACGACGACATCAATGCCTTGTCTCTCTGAGGAATCCGATGATGATGAGCCCGCTAGCTATGGTTCTAAACACAGTAATAGGTCCAACGTTGTCACACACAAAAAGCAGAGAGTCGTCGAGGATGATGATGATGATACTATTAGGGTTAATTTCCCAGCAAGTTTGGACCTTTTTGTTTCCTCTTCTTCTTCTTCTTCTTCGTCATCACTCACTCCAGAATTCTGCAACCAAAACTGGGACCTACTTCCTTGGAATCAGCTTGCAGCTTCATTTCATCAATGTCAATCACCTTTGGTTCCGAGCTTCCTGCTGTGA 822 0.4513 MASNRPSSSDASAKERLRWTHQLHDLFVQAVNRLGGPDRATPKSIVKEMTSMGASGITIYHVKSHLQKYRINKLIPESATRSKLERRSISDILPNFSTLATVQLKEALHLQMEVQKRLSDQLEFQRSLKLKMEAQGRYLERLGQAYQNSTISRKSAGNSNKLHRNNTAPTTTSMPCLSEESDDDEPASYGSKHSNRSNVVTHKKQRVVEDDDDDTIRVNFPASLDLFVSSSSSSSSSSLTPEFCNQNWDLLPWNQLAASFHQCQSPLVPSFLL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1526g00001 273 Pfam MYB-CC type transfactor, LHEQLE motif 102 142 IPR025756 -
Pral1526g00001 273 MobiDBLite consensus disorder prediction 150 208 - -
Pral1526g00001 273 SUPERFAMILY Homeodomain-like 13 71 IPR009057 -
Pral1526g00001 273 Gene3D - 13 74 - -
Pral1526g00001 273 MobiDBLite consensus disorder prediction 150 177 - -
Pral1526g00001 273 NCBIfam myb-like DNA-binding domain, SHAQKYF class 14 72 IPR006447 GO:0003677
Pral1526g00001 273 FunFam Two-component response regulator 10 74 - -
Pral1526g00001 273 Pfam Myb-like DNA-binding domain 17 70 IPR001005 -
Pral1526g00001 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 74 IPR017930 -
Pral1526g00001 273 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 237 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1526g00001 Pral-Chr1526 2315 4451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1526g00001 8 160 G2-like Transcription Factor Family AT4G28610 44.805 2.47e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral1526g00001 Myb_DNA-binding 4.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1526g00001 - - psat:127127459 249.595