Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1512g00007 ATGGAAAACCAACGACGCCGCCGTGAATTGAGCTCCATTAGCTCCGGCGACTTTCTCCGGCAGAATTTAGATCCAATGAGCACCGACCCCACCGATCGTCCTATCATCAAAGAAATGGATTTCTTCTCTTCTGCTTCACCCGTTAAATCTTTTGAGACCAGAAATCACCAGCCCCAAGATCCCCACGACCGGATCAATCACGACGGATCATCAAGTGCTCCCTTACCTGATCGCCCCGTCAACACTGGACTGAATTTGAACTGTGCAAGTCCTGGAATGCCAAGATCAGAAAAGGAGATGCTCAATACTGAACCAAGTTTGAGTGCACTTCAAGGGGAATTGCGGAGGCTGCATGAAGAGAATCAGAAGTTGAAAAATATGCTGGAACAGATTAACCAGCTGCAGGCACATCTGTTCATCGCTTTGTATGAACAAAAGGCTCAGAAGGTTGACGCAAATGGTATGTTGTCGGGACAAGAGAAAATATTGGACCCACGGGCGTCTACCAAATTACACGTCAACAATTCGGTTTCAGACGTCGATAAGACTGGAGAGCTTTCAGTCTCTCCTTCATCAAACAACGCGGAGGTAATGTCAAAGCAACGTGACCACCGCAGCTATCAGTCACCTAAACTTCACGGAAAGGAAGCAGCTTGTCCTGAAAATGTTTCCACGTCGCAAGATCTCAAAAGCGAAGAACCAAAGGCGGACCTTCATTTCAGAAAAGCCAGGGTTTCCGTACGTGCAAGATCAGAAGCTCTTCTGATTAGTGATGGATGTCAGTGGAGGAAATATGGTCAAAAAATGGCCAAAGGTAACCCTTGTCCTCGCGCCTACTATCGTTGTACCATGGCCGTTGGATGCCCCGTTCGTAAGCAGGTGCAGAGATGTGCGGAAGACAAGACGGTGTTGATAACAACGTATGAAGGGAATCACAACCACCCTCTCCCACCGGCGGCCACCGCGATGGCAAATACGACATCGGCAGCCGCAGCGATGCTTCTATCAGGTTCAACCGTGAACAGTGAAGCCTTAACAAATTCAGGTGGAGGGCACTTGTCTTCTATGCCCTACGCTTCAATGGCAACCCTATCAGCCTCTGGACCGTTCCCTACTATCACTTTGGACTTGACTCGGACCCCCAGAAGCGCGCAGCTTCACCGGTCACCGTCCAATGGGGTTACGTTTCCTCTACCGTTGCACGGTCACCCACTGCAGCAAATGGGGCAGTCTATGTTGTTTCCTCATCAGAAGCCACAGTTAGGGCAGCAACGAGAGCCTTCTATGGTGGAGACGATGAGTGCAGCCATTGCCTCCGATCCCAACTTCACTGCGGCGCTGGCGGCGGCAATCTCGTCTATCTTTGGGAGTAATGTGGATAGCGATGGTGGGAGTGGAAATGGAAATGCTATTCCCCTTCTTGGGATTTCTCCGTCGACTCAGCTTCCTCCGTCCTGCACTACATTCTCCACCAACTAG 1479 0.503 MENQRRRRELSSISSGDFLRQNLDPMSTDPTDRPIIKEMDFFSSASPVKSFETRNHQPQDPHDRINHDGSSSAPLPDRPVNTGLNLNCASPGMPRSEKEMLNTEPSLSALQGELRRLHEENQKLKNMLEQINQLQAHLFIALYEQKAQKVDANGMLSGQEKILDPRASTKLHVNNSVSDVDKTGELSVSPSSNNAEVMSKQRDHRSYQSPKLHGKEAACPENVSTSQDLKSEEPKADLHFRKARVSVRARSEALLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTVNSEALTNSGGGHLSSMPYASMATLSASGPFPTITLDLTRTPRSAQLHRSPSNGVTFPLPLHGHPLQQMGQSMLFPHQKPQLGQQREPSMVETMSAAIASDPNFTAALAAAISSIFGSNVDSDGGSGNGNAIPLLGISPSTQLPPSCTTFSTN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1512g00007 492 ProSiteProfiles WRKY domain profile. 251 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1512g00007 492 Pfam WRKY DNA -binding domain 258 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1512g00007 492 SMART WRKY_cls 256 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1512g00007 492 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 96 461 IPR044810 GO:0003700
Pral1512g00007 492 SUPERFAMILY WRKY DNA-binding domain 250 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral1512g00007 492 Coils Coil 107 137 - -
Pral1512g00007 492 MobiDBLite consensus disorder prediction 1 80 - -
Pral1512g00007 492 MobiDBLite consensus disorder prediction 181 233 - -
Pral1512g00007 492 FunFam probable WRKY transcription factor 31 241 318 - -
Pral1512g00007 492 MobiDBLite consensus disorder prediction 14 28 - -
Pral1512g00007 492 MobiDBLite consensus disorder prediction 181 197 - -
Pral1512g00007 492 Gene3D WRKY domain 241 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1512g00007 Pral-Chr1512 32822 35769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1512g00007 2 492 WRKY Transcription Factor Family AT4G01720 41.996 3.33e-83 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral1512g00007 WRKY 5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1512g00007 - - pcin:129287022 669.463