Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1512g00004 ATGGGCAAAGCCTCTAGCTCTTCTTCTTCCTCTATCAGCAGCAACAACCACCCCCTTATCTCAACTGCTTCATCCCTCACCCGCCTCCACCACTCTGACCTTCCTACAGATCTCAGGCTTGGCCTCGGCATTTCAGCAACTCAACATGTCGGCTCTTCTGTTTCAAGGGGGCAAGCAACAGATTGGATCCCAAACCAGCGTGCTCATCATGCGGCAGAAGTAAATGATTGTGGTGATCATGGCAGCTTGTTTGTAAAGGTGTACATGGAAGGCATTCCAATAGGCAGAAAACTCAATCTGGTAGCTCACGACGGCTACCATGGGTTAGTGAGGACTCTGGAAAACATGTTTGACACTACCATTCTCTGGGGGACAGGGATGGATGGGGTGCAACCAGAGAGGTGCCATGTGCTAACATACGAAGACGAAGAAGGAGATTTGGTCATGGTCGGTGATGTTCCGTGGGAGTGA 471 0.5053 MGKASSSSSSSISSNNHPLISTASSLTRLHHSDLPTDLRLGLGISATQHVGSSVSRGQATDWIPNQRAHHAAEVNDCGDHGSLFVKVYMEGIPIGRKLNLVAHDGYHGLVRTLENMFDTTILWGTGMDGVQPERCHVLTYEDEEGDLVMVGDVPWE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1512g00004 156 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 36 155 IPR003311 GO:0005634|GO:0006355
Pral1512g00004 156 Pfam AUX/IAA family 69 156 IPR033389 -
Pral1512g00004 156 SUPERFAMILY CAD & PB1 domains 79 156 - -
Pral1512g00004 156 ProSiteProfiles PB1 domain profile. 82 156 IPR000270 GO:0005515
Pral1512g00004 156 Gene3D - 77 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1512g00004 Pral-Chr1512 23160 23830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1512g00004 86 155 B3 DNA Binding Superfamily AT4G23980 38.571 3.53e-09 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pral1512g00004 AUX_IAA 1.2e-20 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1512g00004 K14484 - gmx:100781660 217.238