Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral150g00004 ATGTCTTCTTCAAAGACTTCAATGATTAGGCAAATTGATGATTCAACAGATAGGTGGAAGATTGTTGCTCGTGTTATTAGGAGATGGAATGTTTATGAAAAAGACTCCCCTGCTGACCTTTTATGTATATCCATGCTACTCATTGATGAAGAGGGGACGAGGATCCAGGCATCGGTTAGCAACAAAAGTGCATTCAAGCTATTTGAAGATAAAGCTTTAGAGGGGAGGAGTTATTTCATTGCTAATTTTTCTGTGGTGGGTAACACTAAGGAGTACAGGGCAACTAAGCATCCATTTAAGATTACATTGGGCAAACATACGTATGTGAAGGAAAGGGAAGCTGATATACCAGAATACTCCTATAATTTCTTCCCTATATCTGAAATTATTGAAATTACAGATAAGAAGAGTGTTGATTATCTCATTGATGTCATTGGATTTGTCACTTCAGTTGGTCCATTGGAAGAATACCGTAATGATTCTGAAATGAAGAATAGGATGCGGTTAACTTTGTCTGATAACTTGGAAAACTCTGTGTCTTGTGTGTTACTTGATGAATGTGCAACAGAGGTGTGTATGATGGACTTCACCAAGATGGATGCTCCTGTGGTAATGTTGATGCAGCTGGCTAGAATTGGGTTTGATGCGAAAGGTAAGCCAGAAGTATGTAGTTCTTTCCATGCTTCTAAAGTTTTATTTAACATGAACTATCCAGAGGTGAAGCATTTTATTAAGAGTGCAAAGTCCTTACCTTCTCCCACGATTAGCACAATTTCTGCAAGTGTATCTTCCAAGGCATCAAATACGGTTGAAAGCTCTGTTATCCAGAATCAACCTTTCATCCCAATTGTTGATATAGCGAAACAAACTATGGGTGAATATTTCTGGATCAGGTGCAAGGTCATTAAGGTGGATACAAGGCATGGATGGAAATATATAGGATGTTCAAAGTGTGGCAGCAAGCCCAAAGATGATGACGTTAAACAGCCTTGCATGGGCAATTTATGCAAGAAGAAGCCAACAACCTACGAGTCTAAGCTTAGAGTCCATTACACAGTCATGGATGAATCTGGAAAGATTAGTGTTGTGTTTTTTGATAAGTTGGCTATACAATTTATTGGAAAAACTGCTGCTGAGCTGGAGAAAGGTCTTCCAAAGGATAAGGATGGTTACATTGATGTCCCAGGTGAGTTAGATTTTCTTGTGGGGAAAAGATTGTTGCTCAAAATGAAGCTGAACCAATATAATGTAGATTTTCCACATTCTAGCATTTCTGTTGCTACATATACTGAAGTTGCTGATCTGATGGATGAATTTAACAGGGCTGGCAAGGCAATTGAAGAGGTGGCAGATGAGGGCTCTGATTACGTAGTTATGCAAGAGGATTTTGCCCAGGACAGTTATCTGCCCCAAACTGAGCCGTGTATGATGGAGGATGTTGTTGTGGTCAAGGTTGATCTTGATGAGATCCCTGTGTCTGAGATGATGCCAGCCACCTATAAGGGGAAAAGGAAGAGCATAGCCAGGAGGATTGGAGGAGGAAGTTCAAAGGGGTTGTCTGTTTCTAATGATTCACCTATCAAGTTTGGAGGGAAAACTTTAAAGTCCATCAAACAGGAGAAGAAATGA 1629 0.399 MSSSKTSMIRQIDDSTDRWKIVARVIRRWNVYEKDSPADLLCISMLLIDEEGTRIQASVSNKSAFKLFEDKALEGRSYFIANFSVVGNTKEYRATKHPFKITLGKHTYVKEREADIPEYSYNFFPISEIIEITDKKSVDYLIDVIGFVTSVGPLEEYRNDSEMKNRMRLTLSDNLENSVSCVLLDECATEVCMMDFTKMDAPVVMLMQLARIGFDAKGKPEVCSSFHASKVLFNMNYPEVKHFIKSAKSLPSPTISTISASVSSKASNTVESSVIQNQPFIPIVDIAKQTMGEYFWIRCKVIKVDTRHGWKYIGCSKCGSKPKDDDVKQPCMGNLCKKKPTTYESKLRVHYTVMDESGKISVVFFDKLAIQFIGKTAAELEKGLPKDKDGYIDVPGELDFLVGKRLLLKMKLNQYNVDFPHSSISVATYTEVADLMDEFNRAGKAIEEVADEGSDYVVMQEDFAQDSYLPQTEPCMMEDVVVVKVDLDEIPVSEMMPATYKGKRKSIARRIGGGSSKGLSVSNDSPIKFGGKTLKSIKQEKK 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral150g00004 542 CDD RPA1_DBD_B_like 143 246 - -
Pral150g00004 542 SUPERFAMILY Nucleic acid-binding proteins 9 113 IPR012340 -
Pral150g00004 542 CDD RPA1_DBD_A_like 20 109 - -
Pral150g00004 542 MobiDBLite consensus disorder prediction 510 542 - -
Pral150g00004 542 PANTHER OS03G0429900 PROTEIN 9 414 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Pral150g00004 542 SUPERFAMILY Nucleic acid-binding proteins 284 417 IPR012340 -
Pral150g00004 542 Pfam Domain of unknown function DUF223 45 137 IPR003871 -
Pral150g00004 542 Gene3D - 114 252 IPR012340 -
Pral150g00004 542 Gene3D - 4 111 IPR012340 -
Pral150g00004 542 Gene3D - 261 447 IPR012340 -
Pral150g00004 542 SUPERFAMILY Nucleic acid-binding proteins 120 247 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral150g00004 Pral-Chr150 113285 116758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral150g00004 19 380 Core DNA Replication Machinery Family AT5G08020 27.586 1.13e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral150g00004 - - pcin:129290097 431.795