Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1509g00004 ATGGCTTTCTCTGCTGATCCATTTACATTCATAGCTTCTGAATTTCCTGTTGTAGTTCAGCTTTCTAATGACTGTGCTTCATGTGTTTCTGACAAAGGGATATGCAGGCTCAACAGCACTGGAGAATTTTATTGTCTCAAAGAAAGACGGGCTTGGAAGCTGGGATTGCTAATAGGTGTACCAAGTGGAACTGTTGTGATTATAATTGGTTTGGTTGTTATTCTATTGCGGAACAAACGGAGACACAAGTCTTTGGGCTCACAAAATCAGTCAAGAACCATTGAATCTGATAATGCTCACTCAAATGTAATCCTAGAAGGTAGACACATCTACTTTAAGTTCCCTGTCTTCTCCTATGAGGAACTCGAAGAAGCAACAAACAAATTTGATCAATCAAGAGAACTTGGAAGTGGAGGCTTTGGAACTGTTTACTATGGAAAACTTAAAGATGGACGAGAAGTTGCTGTTAAGCGGCTGTTTGAGCGCAACTCATGTGTACAGCAATTCATGAATGAAGTTAAGATTCTAACACGCTTGCGGCACAAAAACCTTGTGTCACTTTATGGCTGCACTTCCCGTACCAGTCGTGAACTGCTCCTAGTCTACGAATATATTCCAAATGGAACTCTTGGTTGTCATCTTCATGGAAATCTAGCAAAACCTAGTTCACTATCGTGGCCTTTGAGGATGAGGATTGCCATAGAGACAGCAAATGCATTGTCCTATCTCCATGCTTCCGGCATCGTTCACCGCGATGTCAAATCCAGCAACCTTCTTCTAGATCACCATTTTTGTGTCAAGGTTGCTGACTTTGGTATTTCCAGATTGTTTCCCATGTTTGTGTCTCATGTCTCCACAGCTCCAGCAGGAAGCCCAGGTTATCTGGACCCCGAATATTACCAATTCTGTGAGCTTACTGAAAAGAGTGATGTTTATAGTTTCGGAGTCGTGCTGATTGAGCTCATATCTTCTAAGCCAGCTATCATTGTTACAAGGGCCAAGGATAAGATTAGTTTGGCAAATATGGCAGTTAAGAAGATTCAAAGAAGAGCGTTTACTGAGTTGATAGATCCTTCCCTTTGTTTTGAGTCTGATGACAAGGTTAAGGAGATGATAATCTCAGTGGCAAACTTAGCTTTTCAGTGCCTGCAGAGGGATGGAGAGCTAAGACCTTCCATGGATAAAGTAGTGGAGTTTCTGCAGAAAATTGAAAATGGGAAGGATGATTATCTAAAGCACCTAGAGTTTCGTGGTGCTGGGTTTTCGAACTGGGAGATACATACATCTCTCCCAACCTCACTACTTTTGGATGGAACTAGATCACTAAACGACTCAATGCCACAACTCCCTCCCCGTACAGTATGA 1365 0.4205 MAFSADPFTFIASEFPVVVQLSNDCASCVSDKGICRLNSTGEFYCLKERRAWKLGLLIGVPSGTVVIIIGLVVILLRNKRRHKSLGSQNQSRTIESDNAHSNVILEGRHIYFKFPVFSYEELEEATNKFDQSRELGSGGFGTVYYGKLKDGREVAVKRLFERNSCVQQFMNEVKILTRLRHKNLVSLYGCTSRTSRELLLVYEYIPNGTLGCHLHGNLAKPSSLSWPLRMRIAIETANALSYLHASGIVHRDVKSSNLLLDHHFCVKVADFGISRLFPMFVSHVSTAPAGSPGYLDPEYYQFCELTEKSDVYSFGVVLIELISSKPAIIVTRAKDKISLANMAVKKIQRRAFTELIDPSLCFESDDKVKEMIISVANLAFQCLQRDGELRPSMDKVVEFLQKIENGKDDYLKHLEFRGAGFSNWEIHTSLPTSLLLDGTRSLNDSMPQLPPRTV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1509g00004 454 Pfam Protein tyrosine and serine/threonine kinase 131 400 IPR001245 GO:0004672|GO:0006468
Pral1509g00004 454 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 407 IPR044652 GO:0004672
Pral1509g00004 454 Gene3D Transferase(Phosphotransferase) domain 1 205 413 - -
Pral1509g00004 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Pral1509g00004 454 ProSitePatterns Protein kinases ATP-binding region signature. 135 157 IPR017441 GO:0005524
Pral1509g00004 454 ProSiteProfiles Protein kinase domain profile. 129 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1509g00004 454 SUPERFAMILY Protein kinase-like (PK-like) 111 405 IPR011009 -
Pral1509g00004 454 FunFam Wall-associated receptor kinase-like 20 205 412 - -
Pral1509g00004 454 SMART serkin_6 129 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1509g00004 454 CDD STKc_IRAK 135 403 - -
Pral1509g00004 454 Gene3D Phosphorylase Kinase; domain 1 102 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1509g00004 Pral-Chr1509 39559 42813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1509g00004 11 405 Receptor kinase-like Gene Family AT1G25390 51.980 6.50e-138 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral1509g00004 PK_Tyr_Ser-Thr 5.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1509g00004 - - pcin:129310591 634.024