Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1508g00007 ATGGATCACAAGCTTGACAAAGGAGATCATATCACACCGATCCTTCTGAAAATAATAGAGGAATCACAGATATCTTTGATCATTTTCTCCAAAGATTATGCATCTTCAAAATGGTGTATGGATGAGCTCGTTCACATTATGAAATATAAGGATAAGTACGGAAGGCTTGTCGTCCCAATTTTCTACAACATAGATCCATCAGATATTCGGAAACAGAATGGGAGATTTGGAGATGGATTTGCTAAGCTCATACAGAGATTTAAGCATGACCAAAAAAGAGTGCAGGAGTGGGAAAATGCTTTGACCAAATCGGCAAGTATATCTGGGTGGGATTCAAAGAATTACAGGCCTGAATCCAAACTTGTCAAAAAGATTGTCAAAGATGTTTTGAGCAAATTGAATCACAAGTCATCCATTCACATGGAAGGATTAGTTGGGATCGATCATCAGATTCGGAGAGTTGAAGAGCTAATAAGTGAAGCTCGCGTTGTGGGAATATGGGGTATGCGTGGTATAGGCAAGACCACTCTTGCTACAGCCGTATTTGACAAGTTGAAAGCACAGTTTGAAGCCTTTTGCTTTGTTGAAGATGTGAGACAACAGCTGGCAAAGAATGGATCGAAATGTCTCAAAGAATGCCTCAAAGAATTATTAAAAGATGACGATATTAACACTTACAATTTAAGATCTGCTTTTGTGAGAAGGAGGCTTCAGCGTAAAAAAATTCTTCTAGTACTTGATGATGTGGACAATTTTACAACAGCTGAAGGTTTAATCGAAGCATGTGATTGGTTTGGGGAAGGAAGTAAAATTATTATCACATCAAGAGATATGCAAGTGCTTAAAAATGCTTCTGCTTCTGCATCTCTAGCAACATATCACGTTCTGGAATTGAATCCGCATGATGCCCTTCATCTCTTTTGCTTGAACGCTTTCAAGCAAAATCTACCTTCCGAAAACTACTTGGAGTTATCAAAGTGGGTAGTGGATTATTGTGAAGGAAATCCATTAGCTCTTAAAGTGTTGGGTCGCCATCTTCATGGTAGAGGAAAAGAGGAGTGGGAAAGTGCTCTGGCGAATAGAAGGATCAAATTGAAGGGAAAATAA 1107 0.3884 MDHKLDKGDHITPILLKIIEESQISLIIFSKDYASSKWCMDELVHIMKYKDKYGRLVVPIFYNIDPSDIRKQNGRFGDGFAKLIQRFKHDQKRVQEWENALTKSASISGWDSKNYRPESKLVKKIVKDVLSKLNHKSSIHMEGLVGIDHQIRRVEELISEARVVGIWGMRGIGKTTLATAVFDKLKAQFEAFCFVEDVRQQLAKNGSKCLKECLKELLKDDDINTYNLRSAFVRRRLQRKKILLVLDDVDNFTTAEGLIEACDWFGEGSKIIITSRDMQVLKNASASASLATYHVLELNPHDALHLFCLNAFKQNLPSENYLELSKWVVDYCEGNPLALKVLGRHLHGRGKEEWESALANRRIKLKGK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1508g00007 368 PRINTS Disease resistance protein signature 332 346 - -
Pral1508g00007 368 PRINTS Disease resistance protein signature 163 178 - -
Pral1508g00007 368 PRINTS Disease resistance protein signature 236 250 - -
Pral1508g00007 368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 364 IPR027417 -
Pral1508g00007 368 Gene3D - 141 291 IPR027417 -
Pral1508g00007 368 Gene3D - 297 366 IPR042197 -
Pral1508g00007 368 SMART till_3 2 107 IPR000157 GO:0007165
Pral1508g00007 368 Gene3D - 1 140 IPR035897 -
Pral1508g00007 368 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 361 IPR044974 GO:0006952
Pral1508g00007 368 Pfam NB-ARC domain 160 358 IPR002182 GO:0043531
Pral1508g00007 368 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 110 IPR035897 -
Pral1508g00007 368 FunFam Disease resistance protein (TIR-NBS-LRR class) 1 135 - -
Pral1508g00007 368 Pfam TIR domain 2 142 IPR000157 GO:0007165
Pral1508g00007 368 ProSiteProfiles TIR domain profile. 1 133 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1508g00007 Pral-Chr1508 82922 84597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1508g00007 19 342 WRKY Transcription Factor Family AT4G12020 29.042 7.58e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1508g00007 - - pcin:129286024 491.115