Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1508g00006 ATGGATGCAACCTTTTCTTTAACGCTTATAGAAGCTATCTTGATTTTGCTGGCTATAGCAATTTCTAAGGCTATCAGATTAATCTCTCCGCTTCCTGATAGTTGTAAAGATGCTGTTGATTCGATTCCCACGGTTTCTTCTCCTTCTAATATCATTGTTGCTCCTTCTGCGACCAAATATGACGTCTTTCTTAGCTTTAGAGGGGAAGATACTCGTGACGCTTTCTCAAGTTATCTCTATGAAGCACTTCGCGAAGCTAACATTCATACTTTTATGGATCACAAGCTCCACAAAGGAGATCATATCTCATCTATTCTCTTGAAAACAATAGAAGAATCAGAGATATCTTTGATTATTTTCTCCAAAGATTATGCTTCTTCAACTTGGTGTATGGATGAGCTCTTTCATATTATGAAATGTAAGGATAAATACGGAAGGCTTGTCATCCCAATTTTCTTCCAGGTAGATCCATCAAATATTCGCAAACAGAATGGGAGTTTTGGAGATGGGTTTGCTAAGCTCAAGCAGAGATTTAAGCACAACCAAGAAAGAGTGCAGAAGTGGGAAAATGCTTTGATCAAAGCAGCAAGTCTATTTGGGTGGGATTCAAAAAATATCAGGCCTGAAGCTAAACTTGTCAAAAAGATTGTCAAAGATATTTTGAGCAAATTGAATCGCAAGTCGTCCTTTCATGTGGAAGGACTAGTTGGAATTGATCATCAGATTCAGGAAGTTGAAGAGCTACTGAGTGAAGCTTGCATTGTGGGAATATGGGGTATGGGTGGTATAGGCAAGACCACTCTTGCTAGTGCCGTATTTGAGAGGTTGAGAGCAGAGTTTGAAGCTTCCTGCTTTGTTGAAGATGTAAGAAAACTGCTGGAAAAGAATGGTGGCTTGAATGCATTACAGGAAAAATGCCTTAAAGAATTATTAAAAGATGAGGAGATTAACACTTACAATTTAAGGTCTGATTTTGTGAGAAGAAGGCTTCACCGTAAAAAAATTCTTCTGGTACTTGATGATGTGGACAATTTTATGGCGGCTGAAAATTTAATCAAAGCATGTGGTTGGTTTGGGGAAGGAAGTAGAATTATTATCACATCAAGAGACATGCAAGTGCTTAAAAATACTTCTGCATTTCTAACATATCGTGTTCCAACAATGTATCACCATGATGCTCTTCATCTCTTTAGTTTGAAAGCTTTTAAGCAAAATCAGCCATTCAAAAACTACTTGGAGTTATCAAAGCGGGCAGTGTATTATTGTCATGGAAATCCTTTAGCTCTAAAAGTGTTGGGTTGCTTTCTTCATGGCAGAGGAAAAGAAGTATGGGACAGTGCTCTGACAAAACTAAATCATACTCTTCACAAGGACATTTTTAAAGTGTTGAAATTGAGTTTTGATGGACTTGATGATGACATGCAGAAGAATGTATTTCTTGACCTAGCATTTTTCTTGAACGTAGGACATGGGATTTCTCTAGATTGTACAAGAGGCTTATATGGCTCTCATGCACGTATTGAGATAAGTGTACTTAAAGAGAGATCCCTCATTTCAGTGGATAGATATGGTAATATTGAGATGCATGCTCTATTAGTGGAGATGGGGCTTGAAATTTCTCAGCAACAATTAATATCTAACCCTGAAAAACCCATTCGACTTTGGAGACCCCAAGATGTTTTTCATTTCATGAAAAATGACAAGGGGATTGAGGCAATTCGATGCATGTCATTGGATGCAAGCCAGATAGAAATCATGACATTGAGGGCTAGTCATTTCCAAAGGATGCATTATTTAATGTTCCTTAATGTTTACAAGTCTGATCAAAGAAAGCCTTCAAAGTTGAATATTTGCGGAGAGTTGGATTATCTTTCAAAAGAATTAAGGTTTCTTCATTGGGAAGGATATCTACTGCCATATGTGCCATTACAATTTTGTGCTGAGAATCTCATTAAACTTAATTTGTCTAACAGTAATATCCAACAGCTTTGGGATGGAAATCAGCAATTTCCAAATCTAAAGGAAATATGGCTAGAGAATTCAAAAAATCTCATGGCACTCCCAGATTTGTCTCAAGCCCCAAAGATTAAGTACATGAGTCTTAATGGTTGTGTGAATTTAGATCAAATCCATTCTTCAACTGTCCTGGAAAAGCAAGTCGATTTATTTATAAAAGATTGTGGGCCGATGCGGATAAATGTTGGGGGCAGTATGAAAGGGAGAAGTTCATCAGGGTTTCTGATTGTGCACAATTATTTGGATGTTGTCGATTTGACATTTAATAAAGTGACAATGAAGGTGATGGTATGCGGGAAGATGATGTGTGGTGCTGGATTTAAGCATGTGAGAATGCCATTGAAAGAGAAGGCAGAATTCATGAGAATGGCGACTTTACTTCCATTTATGAGGAGAGTTGTATGGTCTGAGAGTCCAATTGAGTTTGGGCATGATTTCAACCAACATCATACCTATCATGTTTATCATTATTACAGTCAAAATGATTGCTTTGGTATTGAAGTGAGGGTGAGGGGTCATAGAGGCGAAAGTCGTGTGGAAGATGATGAAGAAGAGGATGAGGATGATAGAGAAATGATTAGTGAGAATGAAAGAGAAATGAGTAGTAGAAGTGATCAAGTAGTAGAGATGACATTATTATTAATGGAAGATGAACAAGAAGAGGATGATGATGAGGATGATAGTGAGAGTGCTACCATATTAATAATAACAACACTTATTCCCAACACCATTCCTCGCTGGTCATTATTGGGAATTGAGGCAATTCGATGCATGTCATTGGATGCAAGCAAGATAGAAAGCATTACATTAACGGCTAGTCATTTTCGAAAGATGCATTATTTAATGTCCCTTAAAGTTTACAAGTCAGATCGGGGAAAGCGTTCAAAGTTAAATATTTGCGAAGATTTGGATTATCTCTCAAAAGAATTAAAGTTTCTTAGTTGGGAAGGATATCCACTACCATCAGTGCCATTACAATTTTGTGCTGAGAATCTTATTAAGCTTAATTTGCCAAAGAGTAATATCCAGCAGCTTTGGAATGGATACCAGCAATTTCCAAACCTGGAGGAAATAAGTCTATGGGATTCAAAAAATCTCAGGGCACTCCCGGATTTGTCTCAAGCCCCTAAGATTGAACGGATAATTCTTCGTGGTTGTGTGAATTCGGGTCAAATCCATTCTTCAACTGTCCCGGAAAAGGATATCAATTTATTTATAAAAGATTGTGGGCCAATGCAGATAAATGTTGGGGGCAGTATGCACGAGAGAAGTTCATCAGGGTTAGTGATTGTGCACAATTCTTTGGATCTTGCCGATTTGACATTCAATAAAGTGACAATGAAGGTGATGTTATATGGCAAGATGATATGTGGTGTTGGATTTAAGCATGTGAGAATGCCATTGAAAGAGACGGCAGAATTCATGAGAATGGGAATACAAAGTTTGGCGACTTTACTTCCATTTGTGAGGAGAGTTAAATGGTTAGAGAGTCCAATTGAGTTTGGGCATGATTTCAAGCAACATTATACCTATGATGTTAATCATTATTACAATGGAAATACATACTTTAGTATTGCTGTGTGGGTGAGGAGTGATGGAGAAGAAAGGGGGGTAGAAGATGATGAAGAAGAGGATGAGGATGAGAGAGAAATGATTAGTGAGAATGAAAGAGAAATGAACAGTAAAGGTGATCAAGTAGTAGAGACGGCATTATTATTAATGGAAGATGAACAAGAAGAGGATGATGATGAGAATGATAGTAAGAGTGCTACCACATTAATAATAACAACACTTATTCTCAACACCATCCCTCGCTGGTCATTATTGGTTCGAGTGACATTAAAAGAGAGTGATATTATTATTGGGAATAATGCAAGTTGCAGCAGCATCCCTCAAGTTTCAATTATCCTCAAATCACTTAATGAAGATCGCAGAAGGCGGATTCAGCCTCTCTTAGCAGTACAACTCTCTTCACCAATATCCCCTTTACGTCATCATTCTTTCGGAGTCTTTTATAACTACTTGGAGAGGACGCCACACGATCCTCGTTTTCTTTGTTTCCGCAGCGAATACTTGTCAAATAATCATTTCGATGATCATGATTTAGTTGTTTACTATGCGGAGCATTATTGA 4149 0.3772 MDATFSLTLIEAILILLAIAISKAIRLISPLPDSCKDAVDSIPTVSSPSNIIVAPSATKYDVFLSFRGEDTRDAFSSYLYEALREANIHTFMDHKLHKGDHISSILLKTIEESEISLIIFSKDYASSTWCMDELFHIMKCKDKYGRLVIPIFFQVDPSNIRKQNGSFGDGFAKLKQRFKHNQERVQKWENALIKAASLFGWDSKNIRPEAKLVKKIVKDILSKLNRKSSFHVEGLVGIDHQIQEVEELLSEACIVGIWGMGGIGKTTLASAVFERLRAEFEASCFVEDVRKLLEKNGGLNALQEKCLKELLKDEEINTYNLRSDFVRRRLHRKKILLVLDDVDNFMAAENLIKACGWFGEGSRIIITSRDMQVLKNTSAFLTYRVPTMYHHDALHLFSLKAFKQNQPFKNYLELSKRAVYYCHGNPLALKVLGCFLHGRGKEVWDSALTKLNHTLHKDIFKVLKLSFDGLDDDMQKNVFLDLAFFLNVGHGISLDCTRGLYGSHARIEISVLKERSLISVDRYGNIEMHALLVEMGLEISQQQLISNPEKPIRLWRPQDVFHFMKNDKGIEAIRCMSLDASQIEIMTLRASHFQRMHYLMFLNVYKSDQRKPSKLNICGELDYLSKELRFLHWEGYLLPYVPLQFCAENLIKLNLSNSNIQQLWDGNQQFPNLKEIWLENSKNLMALPDLSQAPKIKYMSLNGCVNLDQIHSSTVLEKQVDLFIKDCGPMRINVGGSMKGRSSSGFLIVHNYLDVVDLTFNKVTMKVMVCGKMMCGAGFKHVRMPLKEKAEFMRMATLLPFMRRVVWSESPIEFGHDFNQHHTYHVYHYYSQNDCFGIEVRVRGHRGESRVEDDEEEDEDDREMISENEREMSSRSDQVVEMTLLLMEDEQEEDDDEDDSESATILIITTLIPNTIPRWSLLGIEAIRCMSLDASKIESITLTASHFRKMHYLMSLKVYKSDRGKRSKLNICEDLDYLSKELKFLSWEGYPLPSVPLQFCAENLIKLNLPKSNIQQLWNGYQQFPNLEEISLWDSKNLRALPDLSQAPKIERIILRGCVNSGQIHSSTVPEKDINLFIKDCGPMQINVGGSMHERSSSGLVIVHNSLDLADLTFNKVTMKVMLYGKMICGVGFKHVRMPLKETAEFMRMGIQSLATLLPFVRRVKWLESPIEFGHDFKQHYTYDVNHYYNGNTYFSIAVWVRSDGEERGVEDDEEEDEDEREMISENEREMNSKGDQVVETALLLMEDEQEEDDDENDSKSATTLIITTLILNTIPRWSLLVRVTLKESDIIIGNNASCSSIPQVSIILKSLNEDRRRRIQPLLAVQLSSPISPLRHHSFGVFYNYLERTPHDPRFLCFRSEYLSNNHFDDHDLVVYYAEHY 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1508g00006 1382 SUPERFAMILY "Winged helix" DNA-binding domain 458 564 IPR036390 -
Pral1508g00006 1382 SUPERFAMILY L domain-like 584 1062 - -
Pral1508g00006 1382 ProSiteProfiles TIR domain profile. 58 224 IPR000157 GO:0007165
Pral1508g00006 1382 MobiDBLite consensus disorder prediction 1206 1234 - -
Pral1508g00006 1382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 482 IPR027417 -
Pral1508g00006 1382 SMART till_3 59 198 IPR000157 GO:0007165
Pral1508g00006 1382 Gene3D - 55 225 IPR035897 -
Pral1508g00006 1382 MobiDBLite consensus disorder prediction 1208 1224 - -
Pral1508g00006 1382 PRINTS Disease resistance protein signature 329 343 - -
Pral1508g00006 1382 PRINTS Disease resistance protein signature 668 684 - -
Pral1508g00006 1382 PRINTS Disease resistance protein signature 422 436 - -
Pral1508g00006 1382 PRINTS Disease resistance protein signature 254 269 - -
Pral1508g00006 1382 Coils Coil 171 191 - -
Pral1508g00006 1382 Gene3D - 226 381 IPR027417 -
Pral1508g00006 1382 Pfam Leucine Rich Repeat 649 668 IPR011713 -
Pral1508g00006 1382 Pfam NB-ARC domain 244 457 IPR002182 GO:0043531
Pral1508g00006 1382 SUPERFAMILY Toll/Interleukin receptor TIR domain 57 201 IPR035897 -
Pral1508g00006 1382 Pfam TIR domain 59 228 IPR000157 GO:0007165
Pral1508g00006 1382 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 919 1075 IPR044974 GO:0006952
Pral1508g00006 1382 FunFam Disease resistance protein (TIR-NBS-LRR class) 56 226 - -
Pral1508g00006 1382 Gene3D Ribonuclease Inhibitor 571 729 IPR032675 -
Pral1508g00006 1382 Gene3D Ribonuclease Inhibitor 844 1081 IPR032675 -
Pral1508g00006 1382 MobiDBLite consensus disorder prediction 846 876 - -
Pral1508g00006 1382 Gene3D - 388 471 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1508g00006 Pral-Chr1508 50173 61450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1508g00006 56 704 WRKY Transcription Factor Family AT4G12020 28.186 6.24e-64 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1508g00006 - - pcin:129286024 966.066