Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1508g00002 ATGCAGAATCACAAATATTTTTACCCCGAGAAGTTTGTACTCCCTTTGGCACCTGAAGCAGTTGACACTTGTTTGCATGCTCCTCTTGTTTCGGCCCTTGATGCAGTTTTACCTTCTGGTGCCAGGCAGGTAACACCCTTTGAAAGAGTTGAACTGCAACCCTCTGAGGTTTGCCCAAAGAATTTCATTATCTTCGATCAGACTGATAACCAAAGCAGAATTATGTTCCATCCCGCGATGGCCAACAAATTTAGTGGTCCTGCCGTGAATGTTCATGCTCCCTGTAATCGAGACTCTGACAAGAACAAAGCTAATCCTGTTGAAGGAGAATTATCATCTTTTGAAGAGGACTCTAAGGACATTGACGCATTGTTGAGCTTGGAAGGGGAGGAACTAGAAGACCATGATGAGGAAGAAGTCAGCACTGCGAGGACTAACGAAAATTATGAAAGTATCTGTGACACTTGCTCCAGTTATGGCTCAAAATCAAAGAAGAGGTCATCGTCATCTGTTCGAAAGTCTTCTACGATCCATGGTCACTGCAGCAACCCTGAAATTAAGCACTGGGAAATGAAGAGAATGATTAGGGTACTGAGAGGGATCGTGCCTGGAGGTGGTGACCAAATGGATTCTGTCACTGTTTTAGATGAAGCTGTGAGATACCTCAAGTCTCTCAAGGTGGAGTCTGAGAAGCTTGGAGTTGCACTCTGA 711 0.4459 MQNHKYFYPEKFVLPLAPEAVDTCLHAPLVSALDAVLPSGARQVTPFERVELQPSEVCPKNFIIFDQTDNQSRIMFHPAMANKFSGPAVNVHAPCNRDSDKNKANPVEGELSSFEEDSKDIDALLSLEGEELEDHDEEEVSTARTNENYESICDTCSSYGSKSKKRSSSSVRKSSTIHGHCSNPEIKHWEMKRMIRVLRGIVPGGGDQMDSVTVLDEAVRYLKSLKVESEKLGVAL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1508g00002 236 MobiDBLite consensus disorder prediction 158 183 - -
Pral1508g00002 236 PANTHER TRANSCRIPTION FACTOR BHLH145 34 235 IPR037546 -
Pral1508g00002 236 MobiDBLite consensus disorder prediction 95 115 - -
Pral1508g00002 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 190 231 IPR036638 GO:0046983
Pral1508g00002 236 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1508g00002 Pral-Chr1508 3297 6969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1508g00002 16 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 40.164 1.16e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1508g00002 - - gmx:100791998 288.885