Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1504g00010 ATGGACAAGTACGAGACTGTCAAGGATTTGGGGGCTGGCAACTTTGGGGTTGCCAGGCTCATGAGGCACAAGGAGACCAAGGAGCTTGTCGCCATGAAATACATCGAGCGAGGCCTCAAGATTGACGAGAATGTGGCAAGGGAAATTATGAACCACAGGTCCCTTCGACATCCCAATATAATCCGCTTCAAGGAGGTAGTTTTGACCCCCACACATTTGGCCATAGTGATGGAGTATGCAGCTGGAGGGGAGCTCTTTGAGAGGATCTGTACTGCTGGCAGATTCAGCGAGGATGAGGCTAGATATTTCTTTCAGCAGCTGATCTCTGGTGTCAATTTCTGTCATGCCATGCAAATATGCCACAGAGATTTGAAGCTGGAAAATACTCTTCTGGATGGAAGCCCTGCCCCTCGCTTGAAGATTTGTGACTTCGGTTATTCCAAGTCATCTTTGCTGCATTCGCGACCCAAATCAACTGTTGGAACTCCCGCTTATATAGCCCCTGAAGTCCTCTCCAGGCGGGAGTATGATGGCAAGTTGGCTGATGTATGGTCATGTGGGGTGACTCTCTATGTCATGCTGGTTGGATCATATCCCTTTGAGGACCATGCAGACCCCAGGAATTTTAGGAAAACAATTCAGCGCATAATGGCTGTCCAATACAAAATCCCTGATTATGTCCACATATCTCAAGATTGCAGACGCCTCCTTTCTCGTATATTTGTTGCAAATCCATTGAAGAGAATAACTCTCAAGGAAATCAAGAGCCACCCGTGGTTTTTAAAGAATCTTCCAAGGGAGCTCACTGAATCCGCTCAAGCTATCTATTATCAGAGAGACAACCCAAGCTTCTCCGTTCAAAGTGTGGAGGAGATAATGAAAATTGTGGGAGAAGCTAGAAACCCACCTCCAGTATCTAGACCTGTCAAAGGATTTGGCTGGGAAGGTGAAGATGAAGAAGAGGAAGCTGAGGTGGAGGAAGAGGAGGATGGAGAAGATGAATATGACAAAAGGGTCAAGGAGGCGCATGCCAGTGGAGAATTTCAAGTCAGTTAA 1056 0.4688 MDKYETVKDLGAGNFGVARLMRHKETKELVAMKYIERGLKIDENVAREIMNHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICTAGRFSEDEARYFFQQLISGVNFCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGSYPFEDHADPRNFRKTIQRIMAVQYKIPDYVHISQDCRRLLSRIFVANPLKRITLKEIKSHPWFLKNLPRELTESAQAIYYQRDNPSFSVQSVEEIMKIVGEARNPPPVSRPVKGFGWEGEDEEEEAEVEEEEDGEDEYDKRVKEAHASGEFQVS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1504g00010 351 MobiDBLite consensus disorder prediction 315 334 - -
Pral1504g00010 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Pral1504g00010 351 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1504g00010 351 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Pral1504g00010 351 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1504g00010 351 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Pral1504g00010 351 PANTHER SERINE/THREONINE KINASE 3 294 - -
Pral1504g00010 351 SUPERFAMILY Protein kinase-like (PK-like) 2 297 IPR011009 -
Pral1504g00010 351 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Pral1504g00010 351 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Pral1504g00010 351 CDD STKc_SnRK2 3 259 - -
Pral1504g00010 351 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1504g00010 351 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pral1504g00010 351 MobiDBLite consensus disorder prediction 304 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1504g00010 Pral-Chr1504 49852 53487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1504g00010 1 264 CBL-interacting serine-threonine protein kinases AT5G01810 45.091 2.13e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pral1504g00010 Pkinase 2.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1504g00010 K14498 - gmx:547968 648.277