Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1503g00001 ATGGAACAAGGTCAATGTTGGGTTTGGACCAAGAGAAAGCACTCATCTTTGAGCTCTTATAATGCTCTTGCTTCACCGAGTCACAACTTCACCTATGGCGATTCATGGGAAGAACAAGCTTTCGCAGAAGATGAGCGTCTTGGTGGGTGTATTTGGCCTCCAAGATCATACTCTTGCAGCTTTTGCAGCAGAGAGTTCAGGTCAGCCCAAGCTCTAGGAGGCCACATGAATGTTCACAGAAGAGATAGAGCTAGGCTAAAGCAACCCCCAAGTCCACAAAAACAAGATGAAACCAGTCTTGAATATCAAAATTCTCTCACATCTACTTCTTTGGCTTATTCCAACGCTAACCCTAATTCTGATCATCATCCCGAGGCTAAATTAGCCCCTCCATCTTTGATTCAAGAGAATTCCGCCCCACCATATGATTCTTGTATTTCATGGTCAAACTTTGCTGAACGAAAATTATATTCTCGAAAGGTCGATCTTATTGGATCTGGGGATGAGAAGATGTCCGAGATAGTAGGCACTGATTGTAATAAGGAAGAAGCTGATATTATGAGCTGCAAGAGGAGAAGAATAACAGATGATTCATCATCAATTCCATTCTCCTCAAAATCAATTCCAGTTGTTAATCGGCACGATCATATCAAGTCTCAGATGTTCGAGTTTATTAGTCCTAGTTCCAGTGAAGAACTAGATCTGGAGCTAAGGCTTGGTCACAGTCCTCCCAAG 735 0.4259 MEQGQCWVWTKRKHSSLSSYNALASPSHNFTYGDSWEEQAFAEDERLGGCIWPPRSYSCSFCSREFRSAQALGGHMNVHRRDRARLKQPPSPQKQDETSLEYQNSLTSTSLAYSNANPNSDHHPEAKLAPPSLIQENSAPPYDSCISWSNFAERKLYSRKVDLIGSGDEKMSEIVGTDCNKEEADIMSCKRRRITDDSSSIPFSSKSIPVVNRHDHIKSQMFEFISPSSSEELDLELRLGHSPPK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1503g00001 245 Gene3D Classic Zinc Finger 54 117 - -
Pral1503g00001 245 MobiDBLite consensus disorder prediction 73 102 - -
Pral1503g00001 245 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 84 IPR013087 -
Pral1503g00001 245 SMART c2h2final6 57 79 IPR013087 -
Pral1503g00001 245 SUPERFAMILY beta-beta-alpha zinc fingers 54 83 IPR036236 -
Pral1503g00001 245 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Pral1503g00001 245 PANTHER OS07G0101800 PROTEIN 33 243 - -
Pral1503g00001 245 Pfam C2H2-type zinc finger 57 81 - -
Pral1503g00001 245 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1503g00001 Pral-Chr1503 2446 3180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1503g00001 1 245 C2H2 Transcription Factor Family AT5G06070 34.082 3.06e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral1503g00001 zf-C2H2_6 9.6e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1503g00001 - - pcin:129291690 381.333