Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1501g00009 ATGGATATGCCATTTCTGAAACTGCTATCCCATTTTCTGCTTCTCACCTTCTTGAATTTCGCTTCCACTTCTGAAGCAGACAGTCCTGCTTACGATGACCACAACTGCACAACGCATAAAAACTTCGCTTCCAATAGCCCCTACCAGTTCAACCTTAACACTCTTTTAATTTCCTTCTATTCCATGGCCGCCGACACTAACACCACTCCTGAATTCAACAACACCAGATGTGGCAGCACAAACACGGACGACGCCGTATATGGAGAGTACATGTGCCGAGATGACGTCCCCACTCAGATCTGTCGAGATTGCGTTCAGGACGCCACAAATAGAATAGCCTCGATGTGTCCCTACCGGAAAGAGGCAATCATCTGGTACGACGAGTGCTTCCTCCGCTATTCCGACCGCTCTTTCTTCTCCACCCTCCAACAACAGCCTGTTCTTAACAGGCCAAGCAGCAGTTGTGAGACTGTCTACGAACGTTCTCCATCATGCTTACGATCAGACATCCAAATCGGAGGCTTGAACAAGACATTGAATGATGCGGTGGTGGAGGCAGTGACATCAGATACCAAGAAATTCGCAACAAAAGAAGCAAGGTTGAGTACTGGAGGATCGGTATACACTCTTGCAGAGTGCACGCCGGGTCTGTCCCCACAATTATGTGGTGAGTGTCTACATGGCCTGATAGAAGATATTCTGAAGGAGAAGGACCACTGGAGTGGTGGATTTCTTAATCCGAGCTGCAATTTGAGATTCGAAAGATACCGATTTTATTATAAGGACAACCAGCCTCCCTCCAGTGGTTCTACCTTTCAAGGGCTTGGAAGTCCTATTCTTGTAGGCTCGGACTGCTCGACCACCGAAAGTTTTACTGCCAACGATCCCTACCTAAACAACCTCAAAAGTCTCACTCTCGAGCTCTCCATGTCATCCAATGACACCAAAAGCAATGGATTCCACAGCACCACAGTCGGAAACAATTCCGACACTACCGTCTACGGCCTCTTCATGTGTCGGGGTGACGTGCCCGTTGGGCTCTGTAATGAATGCGTCAGTAACGGAATTGAGGAACTGAATTCTACGTGTCCCTCTTCGAAGGAGGCTATCATTTGGTATGACATGTGCATGCTTCGCTACTCCAATCGCTCTTTCTTCTCTACCCAAGACACACAACCTATATATACAGCAGTTGCTGGGGATATGCTTGGAAACCAAACAGATGGCTTCAATCGGCTATTAGCTGCTACATTGAGTGGTCTAGTGAAGGCGATATCAAACTCACCGCCCGTAGGAGTGAAGAATTTTGCAACAAAAAAAGAAGTCAGCACTTCAGAGCTTACAACTTTGTATACTCTTGCACAATGTACTCCAAACCTGTCTAGCCAAGATTGCCAAAAATGTCTACAGGATGCTCAGGAAAATATGACGTCATGTTGTCTTGGGAAGCGAGGAGGAAATGTCATGAGTCCTGGCTGCAACTTGAGGTTTGAATCGTACCGATTTTATGATGACAGTAAAAGTGCTGTTTCGATGCCTCCTGCATATCCCCCGACTCCCGAAGTTCACATTTCGGGAAATACAGGAAAAGATCAGGACCACTCACGAACAATTATAACAGCGGTGTCCCTTACTGTTGTCTCAATCATGCTTTTTTGTTTCGGCTTCTATTACTGGAAGAGAAAAAAGAGCAACAGTTACAAGGCCATTCTGAAGAAAAATTTCGGAGCTGAGGGAGCCACATTAGAGTCATTGCAATTCAATTTGGCAACAATTGAAGCTGCAACAGATAAGTTCTCACTTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACATGGGCATTCTTCCCGATGGTAGCAAAATAGCTGTAAAGAGATTGTCAGAAAAATCAAGTCAGGGCTTATTAGAGTTCAAGAATGAGGTTTTACTAATTGCCAAACTTCAACACAGAAACTTGGTTGCATTATTAGGATTTTGCTTGAAAGATCAAGAGAAAATACTTGTCTATGAATACGTTCCTAACAAGAGCCTCGATTATTTTTTATTTGGTTCGTCCCTTCTGATCAAACTGGGTTATATGTCTCCAGAATATATCAAGTTTGGACTATTTTCTGAGAAATCAGATATTTACAGCTTTGGAGTCATTGTTTTAGAAATTATAAGTGGAAAGAATATATCTTCTCAATGTGAATCACATGAATCTCAATATGCTGGTGGACTCTTAAGCGATGCCTGGAAGCATTGGAGGGATGACAATTTGATAGCAATATTGGATTCGAATCTGACAGAAGTTGGATCACACAGTGAAATAATCAAATGCATGCATATTGGCTTGCTGTGTGTTCAAGGAAATCCAGGAGTTAGGCCTTCCATGAACAAAGTTGTTCAATATCTGAGTAATGATTCAGTTCAATTGCCAATTCCTCAAGAGCCAGCATTCTTCATCCATAGTCAAATGGAACCAGCGGAAACCAGTAGGTCAATGGAGGCTCAACTTGCCAACCATAATCAATATTCCATCAATGAAATGTCGGAGAATATAATATCTCCTCGCTAG 2565 0.4351 MDMPFLKLLSHFLLLTFLNFASTSEADSPAYDDHNCTTHKNFASNSPYQFNLNTLLISFYSMAADTNTTPEFNNTRCGSTNTDDAVYGEYMCRDDVPTQICRDCVQDATNRIASMCPYRKEAIIWYDECFLRYSDRSFFSTLQQQPVLNRPSSSCETVYERSPSCLRSDIQIGGLNKTLNDAVVEAVTSDTKKFATKEARLSTGGSVYTLAECTPGLSPQLCGECLHGLIEDILKEKDHWSGGFLNPSCNLRFERYRFYYKDNQPPSSGSTFQGLGSPILVGSDCSTTESFTANDPYLNNLKSLTLELSMSSNDTKSNGFHSTTVGNNSDTTVYGLFMCRGDVPVGLCNECVSNGIEELNSTCPSSKEAIIWYDMCMLRYSNRSFFSTQDTQPIYTAVAGDMLGNQTDGFNRLLAATLSGLVKAISNSPPVGVKNFATKKEVSTSELTTLYTLAQCTPNLSSQDCQKCLQDAQENMTSCCLGKRGGNVMSPGCNLRFESYRFYDDSKSAVSMPPAYPPTPEVHISGNTGKDQDHSRTIITAVSLTVVSIMLFCFGFYYWKRKKSNSYKAILKKNFGAEGATLESLQFNLATIEAATDKFSLENRIGKGGFGEVYMGILPDGSKIAVKRLSEKSSQGLLEFKNEVLLIAKLQHRNLVALLGFCLKDQEKILVYEYVPNKSLDYFLFGSSLLIKLGYMSPEYIKFGLFSEKSDIYSFGVIVLEIISGKNISSQCESHESQYAGGLLSDAWKHWRDDNLIAILDSNLTEVGSHSEIIKCMHIGLLCVQGNPGVRPSMNKVVQYLSNDSVQLPIPQEPAFFIHSQMEPAETSRSMEAQLANHNQYSINEMSENIISPR 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1501g00009 854 Pfam Protein tyrosine and serine/threonine kinase 600 684 IPR001245 GO:0004672|GO:0006468
Pral1501g00009 854 Pfam Protein tyrosine and serine/threonine kinase 691 800 IPR001245 GO:0004672|GO:0006468
Pral1501g00009 854 ProSiteProfiles Gnk2-homologous domain profile. 154 258 IPR002902 -
Pral1501g00009 854 SUPERFAMILY Protein kinase-like (PK-like) 584 830 IPR011009 -
Pral1501g00009 854 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 282 509 - -
Pral1501g00009 854 ProSiteProfiles Gnk2-homologous domain profile. 391 502 IPR002902 -
Pral1501g00009 854 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 560 674 - -
Pral1501g00009 854 ProSiteProfiles Gnk2-homologous domain profile. 30 138 IPR002902 -
Pral1501g00009 854 Gene3D Transferase(Phosphotransferase) domain 1 678 809 - -
Pral1501g00009 854 ProSitePatterns Protein kinases ATP-binding region signature. 605 627 IPR017441 GO:0005524
Pral1501g00009 854 ProSiteProfiles Protein kinase domain profile. 599 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1501g00009 854 Pfam Salt stress response/antifungal 177 256 IPR002902 -
Pral1501g00009 854 Pfam Salt stress response/antifungal 285 382 IPR002902 -
Pral1501g00009 854 Pfam Salt stress response/antifungal 36 135 IPR002902 -
Pral1501g00009 854 Pfam Salt stress response/antifungal 406 500 IPR002902 -
Pral1501g00009 854 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 278 385 - -
Pral1501g00009 854 Gene3D Phosphorylase Kinase; domain 1 560 674 - -
Pral1501g00009 854 Gene3D - 279 385 IPR038408 -
Pral1501g00009 854 Gene3D - 397 502 IPR038408 -
Pral1501g00009 854 Gene3D - 171 258 IPR038408 -
Pral1501g00009 854 Gene3D - 30 138 IPR038408 -
Pral1501g00009 854 ProSiteProfiles Gnk2-homologous domain profile. 279 385 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1501g00009 Pral-Chr1501 118567 123479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1501g00009 694 854 Receptor kinase-like Gene Family AT4G05200 36.527 2.26e-25 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1501g00009 PK_Tyr_Ser-Thr 6.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1501g00009 - - pcin:129286968 561.992