Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1501g00006 ATGGCGGAGTTGTTGCAGAAAAGCTTGAAAGCTCTCTTAAGTGTGAGTGTGGCCTTAGTACTGTTATGGCTTAGACCTTCCATGGCGGCCAAACCAGATGAAGTGCCAGTAGGCGTCATTCTTGACCTGAATTCTGAACTTGGCAAAATGGTTAACAACAGCCTCGCCCTCGCCGTCGAAGATACAGAGCGTTATACAGCCACCAAGATTCGCCTTATAATCCGGAATGTTTCTCAGAACGACGCCGTCGCCGCAGCAGGAAATGCTTCTGAACTAATTGAGAAACACAAAGTGCGTGCCATTCTGGGGCCCCAAAATTCAGAGCAAGCAGGTTTTATAGTGGAACTTGGCTTGGAATCCCAAGTACCTGTTATTTGGTTTCCCATAACTGGCCCATCCCTTTTGCCACCTCCATCACCATCCTCCAATCAAGGCCTTAATTGCTTTCAGTTCCAAGCTATAGCTGCCACCATTGAAGCTCTTGGGTGGCAGTCAATCGTCCCCATTTTTGAAGACACTGAATATGGCGGTCACCTTATTCCATGCCTCAGCAATGTCTTGAAAGATATGGGCATACGAATGGTTAACATAACTGCCATTGATCCAGATTCAACAGATGTTGAAATTGACGACATTCTCGTCAAGTTAAACAACAGGCGAACACATGTATTTCTTGTCCATATGAGCATGGATTTGGGAATAAGATTTATTCAGTCTGCAGAAGAACAAGACATGATGGGAGAAGGATATGCTTGGATACTTACCCAGGGGTTATCTTCTTTAACAGATCCTCAAGTTACGACTGGGAACCCTTTGAAAGGATACATGCAAGGTGCATTGGGAGTGAGGCCAATGGATTCGAACAAAACACGTTGGCGTAGGTGGACACAGAGTTATTTTGACTACAGGTTCAATAGTACCCTATCAGTCTATGGATGGTGGGCTTATCACACAATCGAAGCATTGGCTATGGCATTAGAGAAGCCAGGCGCAGACAATAATGGCACAAAACTTCAAAGTGAAATTTGGGATACTAATTTCACAGGCTTGTCAGGGATAAATTTTAATTTAAAAGGAGGACAACTAGATCAATCGGTGCTTGAAGTATACAATGTGATAGGACCGAGAGAAAGGGTCATTGGTTATTGGAAACCTGAAACTGGACTTGTTCAAAATTTTAGTAAAGGTGCTAAGATATCTGGTAAATACCAACTAAAGGATCCATTGTGGCCGGGTGACACATTGGATAAACCACCAAAGTTGAGGATTGGAGTCGTAGCAACAAATTCTTTTCCTGAATTGGTGAGTGTAGATAATTCGACTACGCCGGTGATGATTCATGGCTTTGCTTTTAATGTGTTCTTAAAAGTTGTCGATGTTTTGCCATTTCCGCTCGATTATGAGTTTGTCCCCTTGCCAAACAAAAGTAGAAGCGGATCTTGA 1443 0.4338 MAELLQKSLKALLSVSVALVLLWLRPSMAAKPDEVPVGVILDLNSELGKMVNNSLALAVEDTERYTATKIRLIIRNVSQNDAVAAAGNASELIEKHKVRAILGPQNSEQAGFIVELGLESQVPVIWFPITGPSLLPPPSPSSNQGLNCFQFQAIAATIEALGWQSIVPIFEDTEYGGHLIPCLSNVLKDMGIRMVNITAIDPDSTDVEIDDILVKLNNRRTHVFLVHMSMDLGIRFIQSAEEQDMMGEGYAWILTQGLSSLTDPQVTTGNPLKGYMQGALGVRPMDSNKTRWRRWTQSYFDYRFNSTLSVYGWWAYHTIEALAMALEKPGADNNGTKLQSEIWDTNFTGLSGINFNLKGGQLDQSVLEVYNVIGPRERVIGYWKPETGLVQNFSKGAKISGKYQLKDPLWPGDTLDKPPKLRIGVVATNSFPELVSVDNSTTPVMIHGFAFNVFLKVVDVLPFPLDYEFVPLPNKSRSGS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1501g00006 480 Pfam Receptor family ligand binding region 55 372 IPR001828 -
Pral1501g00006 480 Gene3D - 27 153 - -
Pral1501g00006 480 PANTHER OS06G0188250 PROTEIN 15 390 - -
Pral1501g00006 480 Gene3D - 154 321 - -
Pral1501g00006 480 SUPERFAMILY Periplasmic binding protein-like I 30 384 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1501g00006 Pral-Chr1501 76044 78461 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1501g00006 34 465 Ion Channels AT2G29120 33.473 3.34e-69 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1501g00006 K05387 - qsa:O6P43_022275 335.109