Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1501g00005 ATGGAGAAAAGGCAAAGATATTGTCTCTTATTTGTGGGCTTACTGTGCCTAATTGCCCTAGCTGAGTCCGCAACTGCAAGAAAAATACCAGTAGGAGTGATTCTGGATTTGAATTCATCACTTGGTCCCACTGTTCGTAATTGCATCAACATCAGTTCCAATCGAACAAAGCTCGACCTTCATTTCAGGAATTCCCGAGGCGATCTCCTCACTGCAGCTTCTGCAGCTTGGGATCTAATAAATGGAACAAAGGTGCATGCAATCCTGGGACCTGAAAACTATGAGCAAGCAAGGTATGTGGTAGAACTTGGTAAGAAGTATGATGTACCAGTGATTTGGTTTTCTCCATCTGGTCCATCTCTTTTGCCACCTCGTTCCCCATTCTCCATCTACTCCAGCTCCACTAGAAGCCATTGCTTTCAGTTCGAAGCTATCGCAGCCATTATCAGAGCTTATAATTGGCAGTCTGTGGTCCCCATTTATGAAGAGCCAGACTTTGGTAATGACCTCATTCCATGTCTCACTTATGCCTTGCAAGAAATGGACACTCTAGTGCCTAACGTAATTGCCATTCGTCGAGATTCTAGTGGTTCTCAAATCGCCGGCGAGCTCAACAAGATAAATCCCGAACGCACATATGTGTTTCTTGCTCATATGACAGTGGAGCTTTGGTCAAGACTTGTGAAACATGCAAAAGATAAAGGGATGATGAGTCAAGGACACGCTTGGATACTTACACAAGGCTTATCCTCAGTGATAGATCCCGAAGCTAAAGATATAAAAGTGAAAGGCTACATGGATGGTTCTTTGGGTGTGAGGCCATCAGTTTCTGTGAGGCAATCACTGAATGTTTCCAGCATTATAGCTAAGCGCTTTTCCTTAGCGAGAACATTAAAGCTTGAGTACAATAAAACTCTTTCTCTATCTGGCATGTGGGCTTACGACACTATCACAGCATTGGCCAATGCGGTAGAGACGGCCAGCTTAGGCGATTCTACTTTCGGATATGGGAATGAAAGTAGAGTTGATCTTGAAGATATAGGAATGCGCAACGAAACAGGCCCAGAACTTCGCAGAGAAATTCTGGCTACTGATTTCGTAGGCCTGTCAGGGAATTTCAGTTTGAGGCTAGGACAACTAGAACCATCAAAAGTTGTGGTATACAATATTGTGAAAGGCCTAAAAGAAAATATCATTGGGTATTGGAGACCCGAAATAGGACTTTTTCAAAATTACAGTGAAAATGGTGAACCAGCTGGTAAATACAAATTAAGGGACCCGCTATGGCCGGGTAACACAACGGAGAGACCACCAAAGTTGAAAATTGGGGTCCCAAAGACGCATTTTACTCAATTTGTTGATGTTAATGGGAGTGTAGAAGGGCAAAATGTGTCAAGTTCTGGCTTGACTGTTGATGTATTTAAAAGAGTGGTTGATGTTTTGCCATTTCCTTTACCTTATGAGTTTGTGCCTATGAGCAATGGAGAGCTGACTCCCTCCAGCTATAATGATCTTCTTTGCCATATCACAGACAAGGCAAGTTTTCATTCATCTCTGTTGCTTCCGATCAATTGTTTTACTTTTATCAGCTTTGCTGTTTCTCAGTTTGTCATAAAGGAAAGTCAGGCATGTGTCTGCATAGTTTCATTGACGATTTTATCCCCCCTGAAGCTTGGATATACTCAAGAACCTCCCAGGATATGA 1704 0.4272 MEKRQRYCLLFVGLLCLIALAESATARKIPVGVILDLNSSLGPTVRNCINISSNRTKLDLHFRNSRGDLLTAASAAWDLINGTKVHAILGPENYEQARYVVELGKKYDVPVIWFSPSGPSLLPPRSPFSIYSSSTRSHCFQFEAIAAIIRAYNWQSVVPIYEEPDFGNDLIPCLTYALQEMDTLVPNVIAIRRDSSGSQIAGELNKINPERTYVFLAHMTVELWSRLVKHAKDKGMMSQGHAWILTQGLSSVIDPEAKDIKVKGYMDGSLGVRPSVSVRQSLNVSSIIAKRFSLARTLKLEYNKTLSLSGMWAYDTITALANAVETASLGDSTFGYGNESRVDLEDIGMRNETGPELRREILATDFVGLSGNFSLRLGQLEPSKVVVYNIVKGLKENIIGYWRPEIGLFQNYSENGEPAGKYKLRDPLWPGNTTERPPKLKIGVPKTHFTQFVDVNGSVEGQNVSSSGLTVDVFKRVVDVLPFPLPYEFVPMSNGELTPSSYNDLLCHITDKASFHSSLLLPINCFTFISFAVSQFVIKESQACVCIVSLTILSPLKLGYTQEPPRI 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1501g00005 567 PANTHER OS06G0188250 PROTEIN 8 385 - -
Pral1501g00005 567 Gene3D - 137 407 - -
Pral1501g00005 567 Pfam Receptor family ligand binding region 46 390 IPR001828 -
Pral1501g00005 567 SUPERFAMILY Periplasmic binding protein-like I 24 438 IPR028082 -
Pral1501g00005 567 Gene3D - 53 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1501g00005 Pral-Chr1501 44315 47673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1501g00005 9 495 Ion Channels AT5G27100 32.239 8.98e-73 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1501g00005 K05387 - qsa:O6P43_022275 359.762