Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1501g00004 ATGCAAGCAGCTTACCATCTGATAAAGAATAGAACAGTACGTGCCATCTTGGGGCCCCAAAAGTCAGAGCAAGCAAGGTTTGTAGTGGAACTTGGTGAGAAATACCAAGTACCTGTTATTTGGTTTCCCATAACTGGTCCATCTCTTTTGCCCCCACCATCCCCATCGTCCATCTACTCCCATCAAGGCCTTGACTGCTTTCAGTTCCAAGCTATCGCTGAGGTTATTGAAGCTCTTGGGTGGCAATCAATCATCCCTATTTATGAAGACATTGAATATGGCAGTCACCTTGTTCCATGCCTCTCCAATGTCTTGAAAGATACGGGCATACGAATGGCTAACGTAACTGCCGTTGATTCAGATTCATCATGTGGTGAAATTAACGACACTCTCCTCCAGTTAAAGGACATGCGCACACATGTATTTCTTGTCCATATGAGCATGGATCTCGGAGCAAGATTTGTTTTTTCTGCAGAAGAGCAAAACATGATGGGTGAAGGATATGCTTGGATACTTACCCAAGAGCTATCTTCTTTGACAGATCCTCGAGTTAATACTACCAGAAGATTGTATTATAACCAGACGACATATAGGAATATTACTGTTTCTGTTGCTTTGAAAAGATACATGCAAGGTGCCTTGGGAGTGAGGCCAATGGATTTGATCTCCAAAAAGACAACTATTCGTTGGGAGAAAGAGAAGAATTTCACTAATAGGTTCAGGACTACCCTAACTATCTATGGATGGTGGGCTTACCACACAATTGAAGTATTGGCTAAGGTGGTAAAGAAGCAAGGCACAGACAATGGCATAAAACTTCGCAGTAAAGATATTCAGGAGGCTGCTGATTTCAAAAGTCAGTCAGGGGTAAATTTTAATTTAAGTGATGGGCGACTATATCAATCGGAGCTTGAAGTATACAATGTGATAGGAGACAGAGAAAGGATAATCGGATGCTGGAGCCCTAAAACTAGACTTGTTCAAAATTGTAGTAAAGGTAGCAGCACATCTGATGGTGAATACCCACTAAAGCATCCACTATGGCCAGGCGACACATTGGATAAACCACCCAAGTTGAGAATTGGAGTCCCTAAAACAAATTCTTTTCCTGAATTTGTGAATGCATATAATTTAAGTAAGCTCCAGATTGATAGTGGTGGCTTTGCTGTTAATGTGTTCTTAAAAGCAGTCCAGGTTTTGCCATTTCTGTTAAATAATTATGAGTTTGTTCGCTTGGATGATACTGGCATGACCTTTGATGATCTTCTCTGCGACCAATTGCTGAAAGTGAAGGCAGGTTTTCATTCTTTTCCTCTTTGA 1320 0.4129 MQAAYHLIKNRTVRAILGPQKSEQARFVVELGEKYQVPVIWFPITGPSLLPPPSPSSIYSHQGLDCFQFQAIAEVIEALGWQSIIPIYEDIEYGSHLVPCLSNVLKDTGIRMANVTAVDSDSSCGEINDTLLQLKDMRTHVFLVHMSMDLGARFVFSAEEQNMMGEGYAWILTQELSSLTDPRVNTTRRLYYNQTTYRNITVSVALKRYMQGALGVRPMDLISKKTTIRWEKEKNFTNRFRTTLTIYGWWAYHTIEVLAKVVKKQGTDNGIKLRSKDIQEAADFKSQSGVNFNLSDGRLYQSELEVYNVIGDRERIIGCWSPKTRLVQNCSKGSSTSDGEYPLKHPLWPGDTLDKPPKLRIGVPKTNSFPEFVNAYNLSKLQIDSGGFAVNVFLKAVQVLPFLLNNYEFVRLDDTGMTFDDLLCDQLLKVKAGFHSFPL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1501g00004 439 SUPERFAMILY Periplasmic binding protein-like I 2 321 IPR028082 -
Pral1501g00004 439 Pfam Receptor family ligand binding region 2 271 IPR001828 -
Pral1501g00004 439 PANTHER OS06G0188250 PROTEIN 2 304 - -
Pral1501g00004 439 Gene3D - 67 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1501g00004 Pral-Chr1501 37168 38487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1501g00004 3 416 Ion Channels AT5G27100 30.786 7.62e-53 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1501g00004 K05387 - qsa:O6P43_022275 263.462