Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1501g00003 ATGGAGAGAAGGGGAAGAGAATCTCTCATATTTGTGAGCTTATTATGCCTAATGGTAACCCTAACAGAGTCTGCGACTGTGACCATACCAGTAGGAGTGATTCTGGATTTGAACTCATCACTTGGTAGTATCACCCTCAACTGCACCAACCTCGGACTCCTCGACTTCTATTCCACACATGATTCCTACGCGACCAGGCTCCAACTCCATTTCTGGCATTCTGGAAACGATCTCCTCACTGCAGCTATTGCAGCTTGGAATCTGATAAATGGAAAAAAGGTGCATGCAGTCCTGGGACCTCAAAACTCAGAGCAAGCGAGGTATGTTGTAGAACTTGGTAAGACGAACGATGTACCAGTGATTTGGTTTTCTCCATCTGGTCCATCTCTGTTGCCACCTCGTACCCGATTCTTCATCCACTCCAACTCCACCAGAAGCCATTGCTCTCAGTTCGAAGCTATAGCAGCCATTATCGAAGCTTATGATTGGCAGTCTGTGATCCCCATTTATGAAGATCCAGAATTCGGCAACGACCTCATTCCATGCCTCTCTTATGCCCTGCAAGACATGGACACTCGAATGCCTTACATAAGTGTCATCAATCAAACTTCCACGGATTCTCAAATCGCCGGTGAGCTTAACAAGATAAAAGCCCAGCGAACATTTGTGTTTGTCGTTCATATGTCTCTGGAGCTTTGGTCAATATTTGCGGAACATGCCAAAAATGCGGGCATGATGAGCGAAGGATACGCTTGGATACTTACGCAAGGCCTGTCTTCTGTGATGGATCCCGAAGCTTTAGATGTCAGAATGAAAGGCTATATGGATGGTGCGTTGGGTGTGAGGCCATTCGTGTTATCCAACTTAACTAAGCGCCTTTCCTTAGTTAGAAAATTAAAGTCTGAGTACGATAAAACTCTTTCTCTAAATGGCTTGTGGGCTTATGACACTATCACAGCATTGGCCAGAGCCGTAGAGAAGGCCGGCTTAGTCAGTTTTAATGAAAGTGGAGCTGATCTTCGCAACGAAACAGGCCCAGAACTTCGCGGAGCAATTCTGGATACTGATTTCGTTGGCTTGTCAGGGAATTTTAATTTGAGGCAAGAACAACTAGAACAATCACATGTTGTGGTATACAATGTGCAAGGCCAAAAAGAAAGGACAATTGGATATTGGAGCCCCGAAAAAGGACTTGTTCGAATGCAAAGTGTACGTGGTGAACCAATATGGCCGGGTAACACTAAGGAGATACCACCCAAGTTGAAAGTTGGGGTCCCAAAGACGCATTTTACTGAATTTGTTGATGTTAATGGGAGTGTAGAAGGGCAGCATGTATCAGTTGCTGGCTTTGCTGTTGATGTATTTAAGCAAGTGGTTGGCCTCTTGCCATTACCTTTACGTTATGAGTTTGTGCCTTTGAACAACAGTGATGGAGAGCTGACTCCCTTCAGCTATGATGATCTTCTCTGCCAATTCGCAGACAAGAAAGTTGATGTTGATGTTATAATTGGAGACATTACAATTGTAGTGAGTCGCACAAATTGTGTTGATTTCACAATGCCGTATTTAGATTCAAGTGTGTCCATGGTGGTAAAGAAAACGGAGGATGATGTCACGGGAAGCAAATCCGAAATTAAAACAAAGGATGATGTTAGAGGAAGCAAATCTGCAAATAAAACAGAGGAAAATGTCGAAGGAAGCAAATCCAAAGAAAAAACAGAGGATGATGTCACAGAAAGCAAAGCTGAAAATAAAACAGAGGATGATGTCAGAGGAAGCAAATCCGAAAATAAAACGGAGGATGATGCTGGAGGAAGCAAATCCAAAGACTTTGTCCGCAATCCCTTCCTTATTTACATGAGCGATGTTGGGTTTTTGAAAAGTGGCACATCTAAATGGCTGGTGATAGGGGTCATGTTTATATTGACCATAGTACTGCAAGTTTATACCGCAAATTTGACATCAATTTTAACAGATAGGACAAACCCGAAGCCTCCTCCATGGAAGGACGTGCAGGAGATTAGAAGGAGCAATCGGAAATCGTAA 2046 0.435 MERRGRESLIFVSLLCLMVTLTESATVTIPVGVILDLNSSLGSITLNCTNLGLLDFYSTHDSYATRLQLHFWHSGNDLLTAAIAAWNLINGKKVHAVLGPQNSEQARYVVELGKTNDVPVIWFSPSGPSLLPPRTRFFIHSNSTRSHCSQFEAIAAIIEAYDWQSVIPIYEDPEFGNDLIPCLSYALQDMDTRMPYISVINQTSTDSQIAGELNKIKAQRTFVFVVHMSLELWSIFAEHAKNAGMMSEGYAWILTQGLSSVMDPEALDVRMKGYMDGALGVRPFVLSNLTKRLSLVRKLKSEYDKTLSLNGLWAYDTITALARAVEKAGLVSFNESGADLRNETGPELRGAILDTDFVGLSGNFNLRQEQLEQSHVVVYNVQGQKERTIGYWSPEKGLVRMQSVRGEPIWPGNTKEIPPKLKVGVPKTHFTEFVDVNGSVEGQHVSVAGFAVDVFKQVVGLLPLPLRYEFVPLNNSDGELTPFSYDDLLCQFADKKVDVDVIIGDITIVVSRTNCVDFTMPYLDSSVSMVVKKTEDDVTGSKSEIKTKDDVRGSKSANKTEENVEGSKSKEKTEDDVTESKAENKTEDDVRGSKSENKTEDDAGGSKSKDFVRNPFLIYMSDVGFLKSGTSKWLVIGVMFILTIVLQVYTANLTSILTDRTNPKPPPWKDVQEIRRSNRKS 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1501g00003 681 MobiDBLite consensus disorder prediction 538 606 - -
Pral1501g00003 681 Pfam Receptor family ligand binding region 64 383 IPR001828 -
Pral1501g00003 681 PANTHER OS06G0188250 PROTEIN 12 375 - -
Pral1501g00003 681 Gene3D - 146 398 - -
Pral1501g00003 681 MobiDBLite consensus disorder prediction 659 681 - -
Pral1501g00003 681 Pfam Ligated ion channel L-glutamate- and glycine-binding site 438 534 IPR019594 GO:0004970|GO:0016020
Pral1501g00003 681 Gene3D - 66 373 - -
Pral1501g00003 681 SUPERFAMILY Periplasmic binding protein-like I 28 419 IPR028082 -
Pral1501g00003 681 Gene3D - 418 593 - -
Pral1501g00003 681 SUPERFAMILY Periplasmic binding protein-like II 419 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1501g00003 Pral-Chr1501 17071 21473 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1501g00003 11 531 Ion Channels AT2G29110 37.766 5.95e-95 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1501g00003 K05387 - qsa:O6P43_022275 411.379