Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1497g00002 ATGGCAAACCACGTTGAACTTTCAGCCCTCAATCGTATAAAATTGCATCTTCTAGGTGAACTGTCTCCTGTTGGCACTTTCTCCAGTGGCCGTAGCAGTTCAGCGAGCGATGCAACCCAACAATTCTGGTTTGGTGAGTCAAACGGAGCAATTTCCAGCTCTAACTCTGACTCTCTCTGTCAATCATCGAGCTCTGAATCTTCTCTCACTGTGTCCGATTACCTCCCTGAGCTATTCGAATTTCCATCCAACTCCTCTAATCTATTTGAGTTCGAGTTCAAAAATCAAGTCTTTGACCTCTCAACGCCTAAATTCGAGACCGAAACTTCACGATTTGACGCCAATTTTTCCCAATTCGAATCAAACTCACAGGCAACATCAAGCTCTGGCTCACAGCCCAGCAGTTGCATGTTTGAGTTTCAAACTAGACCCCAAAGCGTCGAGAAGAGACCTCATTCCAATCGGAAAACATCTCTGCAAATTACGCTACCCAAAAAAACCGAGTGGATCCAATTTGGAAAGACGGATCAACAACAGGAGGTTTCAGAAATGTTCGAGCAGAATAATTCAAACCATGAAGAGAAAAGGCACTACAGAGGGGTCCGACAGAGACCTTGGGGCAAGTTCGCAGCCGAGATCCGGGACCCGAACAAACGTGGATCTAGGGTGTGGCTCGGAACATTCGACACAGCGATCGAAGCCGCAAAAGCCTACGACCGAGCCGCGTTTAAGCTTCGAGGCTCAAAAGCCATTCTCAATTTCCCCCTCGAAGTAGCGACCTCCGATTCGACGGACGGCACGGAGGAGAAAAAACGCCGGCGGGAAGATGATGAGGCGGAGGCTGAAATGGAAGTGAAACCAGTGGTGAAGAAAGAGAAAACGACGGAATCTGACGTGGGAAGGATGAGGGATATGCCGTTAACGCCGTCAACGTGGATGGGATTCTGGGAGAACGATTTGAAGGATGTATTCCCAGTCCCGCCGCTATCACCGTTATCTCCACATCCGCCTTTGGGCTGTCCGCAGCTTATGGTTGTATGA 1041 0.489 MANHVELSALNRIKLHLLGELSPVGTFSSGRSSSASDATQQFWFGESNGAISSSNSDSLCQSSSSESSLTVSDYLPELFEFPSNSSNLFEFEFKNQVFDLSTPKFETETSRFDANFSQFESNSQATSSSGSQPSSCMFEFQTRPQSVEKRPHSNRKTSLQITLPKKTEWIQFGKTDQQQEVSEMFEQNNSNHEEKRHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEVATSDSTDGTEEKKRRREDDEAEAEMEVKPVVKKEKTTESDVGRMRDMPLTPSTWMGFWENDLKDVFPVPPLSPLSPHPPLGCPQLMVV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1497g00002 346 MobiDBLite consensus disorder prediction 263 285 - -
Pral1497g00002 346 PRINTS Ethylene responsive element binding protein signature 237 257 IPR001471 GO:0003700|GO:0006355
Pral1497g00002 346 PRINTS Ethylene responsive element binding protein signature 198 209 IPR001471 GO:0003700|GO:0006355
Pral1497g00002 346 SUPERFAMILY DNA-binding domain 197 257 IPR016177 GO:0003677
Pral1497g00002 346 MobiDBLite consensus disorder prediction 122 157 - -
Pral1497g00002 346 Gene3D AP2/ERF domain 196 257 IPR036955 GO:0003700|GO:0006355
Pral1497g00002 346 ProSiteProfiles AP2/ERF domain profile. 197 255 IPR001471 GO:0003700|GO:0006355
Pral1497g00002 346 MobiDBLite consensus disorder prediction 261 285 - -
Pral1497g00002 346 CDD AP2 197 255 IPR001471 GO:0003700|GO:0006355
Pral1497g00002 346 MobiDBLite consensus disorder prediction 122 142 - -
Pral1497g00002 346 SMART rav1_2 197 261 IPR001471 GO:0003700|GO:0006355
Pral1497g00002 346 Pfam AP2 domain 197 247 IPR001471 GO:0003700|GO:0006355
Pral1497g00002 346 FunFam Ethylene-responsive transcription factor 2 196 257 - -
Pral1497g00002 346 PANTHER DNA-BINDING DOMAIN 135 281 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1497g00002 Pral-Chr1497 6933 19410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1497g00002 94 346 AP2-EREBP Transcription Factor Family AT5G47230 48.047 3.80e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pral1497g00002 AP2 6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1497g00002 K09286 - qsa:O6P43_034054 342.043