Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1497g00001 ATGCCAGAATCACTCGCCGGAGGAAGCGATTGGGGCGGCGATATGTATGGACAGGCGAATTATGAGTCGGATTTCGCCTTCTTGGAGTCAATTCGACTCCTGCTCGGTGACTTTGAGGCTGTTTCTGCTGATTCGGATACTTCTTCGGGTTCCGCTCCGGTTTACACTCGGAGCTCCAGCTTCAGCAGCTTGTACCCGTGTTTGACGGACACTTGGGGTGAGTTGCCGCTCAAGGAGGACGATCCCGAAGACATGGTGCTCTACGGCGTTCTCCGCGATGCCGTCAACGTCGGGTGGGTTCCATCTCTCGATGTCGGGTCACCCGAAAGCATTTCTTCTGGTTTCGCCCCGACTATTACAGTAAAATCGGAGCCCGATCTTTTGCCGGTTTTGGATTCCCCTGCGAGTCCTCCTGTGGTAAAGCAAGAGAAGGTGGTTGAGGCAGTCGTACCCGCCGCAGTTCCGTCGAAGGGCAAGCATTACCGAGGAGTAAGACAACGACCATGGGGGAAATTCGCGGCGGAGATCCGTGACCCGGCGAAGAACGGAGCTCGGGTCTGGCTCGGAACATTCGAGACAGCCGAAGACGCAGCTCTAGCTTACGATCGTGCCGCGTACAGGATGCGAGGCTCACGCGCTCTGCTGAATTTTCCACTGAGAGTGAATTCAGGCGAACCCGACCCGATTAGAGTGACATCAAAGAGGTCATCGCTGGAGAGATCGTGGTCGCCGACGTCGTCGTTGTCGTCGGAGAGCGGGGCATCGCCGAAGAGGAGGAAGAAGGTGGGGACAGTCTGA 798 0.5677 MPESLAGGSDWGGDMYGQANYESDFAFLESIRLLLGDFEAVSADSDTSSGSAPVYTRSSSFSSLYPCLTDTWGELPLKEDDPEDMVLYGVLRDAVNVGWVPSLDVGSPESISSGFAPTITVKSEPDLLPVLDSPASPPVVKQEKVVEAVVPAAVPSKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPIRVTSKRSSLERSWSPTSSLSSESGASPKRRKKVGTV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1497g00001 265 MobiDBLite consensus disorder prediction 235 253 - -
Pral1497g00001 265 ProSiteProfiles AP2/ERF domain profile. 160 218 IPR001471 GO:0003700|GO:0006355
Pral1497g00001 265 CDD AP2 159 218 IPR001471 GO:0003700|GO:0006355
Pral1497g00001 265 PANTHER DNA-BINDING DOMAIN 147 245 IPR044808 GO:0003700|GO:0009873
Pral1497g00001 265 SUPERFAMILY DNA-binding domain 160 220 IPR016177 GO:0003677
Pral1497g00001 265 MobiDBLite consensus disorder prediction 224 265 - -
Pral1497g00001 265 Gene3D AP2/ERF domain 159 221 IPR036955 GO:0003700|GO:0006355
Pral1497g00001 265 PRINTS Ethylene responsive element binding protein signature 184 200 IPR001471 GO:0003700|GO:0006355
Pral1497g00001 265 PRINTS Ethylene responsive element binding protein signature 161 172 IPR001471 GO:0003700|GO:0006355
Pral1497g00001 265 FunFam Ethylene-responsive transcription factor 2 159 219 - -
Pral1497g00001 265 SMART rav1_2 160 224 IPR001471 GO:0003700|GO:0006355
Pral1497g00001 265 Pfam AP2 domain 160 210 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1497g00001 Pral-Chr1497 5797 6964 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1497g00001 15 259 AP2-EREBP Transcription Factor Family AT4G17500 57.588 7.18e-82 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral1497g00001 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1497g00001 K09286 - qsa:O6P43_024387 311.227