Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1493g00006 ATGACACAACCGTTTCAGGAAATCGTGGGGCTTAAGAATCAGGAAGGGGCAAGTTCAGAACTTGTCAATGAGGGCAACAATAAGCAGGTGCCACAATCTTCTTTAGCATACTTGGAGCTGCTGAGTAATTACGCAGGCAGGTTCAAGAAGTTAAGGGTCCAAGACATAACCGACTCGAACAATAGTGAAGCTCATGCAGGTCACCAGGATTTGTCAGCTGAAGAAATAATAAGAGTGGCTGGAGCAAGGTACGTACAATTTTCTACTCATTGGTGTGATGATTATTGCATGCCTCTGCACCCATATGCCTCTGGTCTCGAGGATCTGTCTGAAAAAGAAAATAGAGATGTTGAACTTGCACAGTTTCTTCTTGCTGCGGCCGAGAGGGTTAGTTGCCAACAGCTTGAACGTGCAAGCAGGATGCTTCTTCATTGCTTATTTAATTCATCTCCTGGCGGAAATGCTATGCAGAGAGTTATCTTTCATTTCGCTCAAGCACTTCGAGAGAGAATTGAAAAAGAAGCAGGGGGCACCATTTTGATGGGTTGTCCAAAGAACATAGAAAACGAGTTAATTCAAAACTTGGATACCAACATAGCCCTTGCTTGTCATCAGAAAATTCCTTTCAACCAAGTGATGCAATTCGCTGGTGTACAAGCTATGGTGGAGCACGTTGCACATGATACAAAAATCCATGTTATAGATCTTGATATCAGGCGTGGAATTCAGTGGACGTGTTTGATGCAGGCACTCGTAGGGAGGAACGAAAGCAGAGTGGAGCTCTTGAAGATAACTGCTATAGGAATTGTTGGCCAGCCTACTGTAGAAGAAACTGGCAAAAGATTGACGAGTTTCGCTAGATCGTTGAACTTGCCATTCGCATATAAGCAAGTTTATGTTACAGACATGATCGAAATTACAGAACAACATTTTGAAATTGAAGATGATGAAGCCGTGGCTGTCTACGCTCTGTATGTACTTAGGACTATGGTATCAAGGCCAGCTTGCTTGGAAAACCTGATGAGTGTAATAAGAAATATCAAACCAATTATAATGGTAGTTCTTGAAGTGGAAGCCAATCATAATTCATCCTCATTCGCAATTCGCTTCATTGAAGCATTGTTCCACTACTCGGCGTTTTTTGATTGCCTCGAGACCTGCTTAAAAGGTGAAAACAGGAGCAGAATGGCAACGGAAGCAATATTATCTGAAGGGATACGAAACATTGTTGCTGCGGAAGGGGAGAAAGAACAGTGA 1257 0.4272 MTQPFQEIVGLKNQEGASSELVNEGNNKQVPQSSLAYLELLSNYAGRFKKLRVQDITDSNNSEAHAGHQDLSAEEIIRVAGARYVQFSTHWCDDYCMPLHPYASGLEDLSEKENRDVELAQFLLAAAERVSCQQLERASRMLLHCLFNSSPGGNAMQRVIFHFAQALRERIEKEAGGTILMGCPKNIENELIQNLDTNIALACHQKIPFNQVMQFAGVQAMVEHVAHDTKIHVIDLDIRRGIQWTCLMQALVGRNESRVELLKITAIGIVGQPTVEETGKRLTSFARSLNLPFAYKQVYVTDMIEITEQHFEIEDDEAVAVYALYVLRTMVSRPACLENLMSVIRNIKPIIMVVLEVEANHNSSSFAIRFIEALFHYSAFFDCLETCLKGENRSRMATEAILSEGIRNIVAAEGEKEQ 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1493g00006 418 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 96 415 IPR005202 -
Pral1493g00006 418 Pfam GRAS domain family 120 416 IPR005202 -
Pral1493g00006 418 ProSiteProfiles GRAS family profile. 110 418 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1493g00006 Pral-Chr1493 18078 19334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1493g00006 117 415 GRAS Transcription Factor Family AT1G66350 30.333 3.70e-39 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral1493g00006 GRAS 3e-67 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1493g00006 - - gmx:100791952 498.049