Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1493g00002 ATGGCTTCGAATCACCGTCCAGCAAGTTCGGGATCTGATGACCCAAGATCTGATGTTGTGGACGAGAGGAAGAGAAAGAGGATGCAGTCTAACCGTGAATCGGCGAGGCGATCACGGATGAAGAAGCAGAAGCAACTGGAAGATCTGACCAATGAGATCAGCCGATTGCAAAGTGCAAACAGTCAGTTAGTGCAGAACATAAAGGAAAAGGAGGACGCATACAATGAGATGGAATCCAAGAACACTGTCCTTAGGGCGCAGACTATGGAGTTGTTCGAACGATTGCGCTTTCTGAACTCAATACTTGAGATCGCTGAAGAGGTCAGCGGGCTTTCTGTTGAGATCCCCGAGATACCAGATCCTCTCCTGAAGCCATGGCAGCTTCCTTATCCGATACAGCCGATCACAGCTTCGTCAGACTTCGGCCTGCATTGA 435 0.4943 MASNHRPASSGSDDPRSDVVDERKRKRMQSNRESARRSRMKKQKQLEDLTNEISRLQSANSQLVQNIKEKEDAYNEMESKNTVLRAQTMELFERLRFLNSILEIAEEVSGLSVEIPEIPDPLLKPWQLPYPIQPITASSDFGLH 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1493g00002 144 MobiDBLite consensus disorder prediction 11 47 - -
Pral1493g00002 144 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Pral1493g00002 144 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Pral1493g00002 144 MobiDBLite consensus disorder prediction 1 47 - -
Pral1493g00002 144 CDD bZIP_plant_GBF1 24 75 IPR045314 GO:0003700|GO:0006355
Pral1493g00002 144 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 84 IPR004827 GO:0003700|GO:0006355
Pral1493g00002 144 Coils Coil 32 87 - -
Pral1493g00002 144 SUPERFAMILY Leucine zipper domain 23 76 IPR046347 GO:0003700|GO:0006355
Pral1493g00002 144 Gene3D - 21 75 - -
Pral1493g00002 144 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 105 - -
Pral1493g00002 144 Pfam bZIP transcription factor 23 81 IPR004827 GO:0003700|GO:0006355
Pral1493g00002 144 FunFam BZIP transcription factor 21 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1493g00002 Pral-Chr1493 8036 9392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1493g00002 1 141 bZIP Transcription Factor Family AT3G62420 57.343 2.25e-50 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral1493g00002 bZIP_1 4.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1493g00002 K25786 - gmx:780550 194.897