Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1492g00001 ATGGAGTTTAATAAAAAAATTATCCTCGTGGTTCCCCTCATCTGTTGCTCGCTCCTTTCGGGCATCGACGCCGTTCCCTCATATCGCGTCAAACTGCTCGAAGAGCCTCCGTCGGCAGCCCCAGCTCCGTCTCCCTCCGACGACCTCGGAGGCAACACAGCGGCGTCACACAACGCTCAGCTGACAGCTCTGTGCAGTGACGCAGAGTCTCCACCTCTGTGCGTGAACACCATCGCGCCATTCATCCAAGGCGCGCTTGACCCCGTGGTGGCCGTGAAGGTCGAAATGGGGGCGACCATGAACATCACTACAAAGGTCTCTGAGACAATCAAGGCTTTGCAAGCCAAACCAGATATCACGAAAGACGAAAAGGCGTCACTGGACATATGCGCAGACCAGTACTCATCGATTGTGGATACTATAAATGATTGTTTGGATTCCGTCAAGCAGAACGACGTGTACGATGCCTGGATGAAGTTCTCGTCGGTGCTGTCGTACCAACAGGCATGTGAAGATGCTTTTAAGGAGGGTGGGGGTTCCATTCCCTTCCCGGAGGATTCGAAGACTCTGTTCCAGTTGGGCGGTAATTGCTTGGCCATCCTCATGCATCTATCTGGCGAAACCTCGACTTATTAA 636 0.5299 MEFNKKIILVVPLICCSLLSGIDAVPSYRVKLLEEPPSAAPAPSPSDDLGGNTAASHNAQLTALCSDAESPPLCVNTIAPFIQGALDPVVAVKVEMGATMNITTKVSETIKALQAKPDITKDEKASLDICADQYSSIVDTINDCLDSVKQNDVYDAWMKFSSVLSYQQACEDAFKEGGGSIPFPEDSKTLFQLGGNCLAILMHLSGETSTY 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1492g00001 211 CDD PMEI-like_2 58 200 - -
Pral1492g00001 211 NCBIfam pectinesterase inhibitor domain 54 204 IPR006501 GO:0004857
Pral1492g00001 211 SMART PMEI_2 56 200 IPR006501 GO:0004857
Pral1492g00001 211 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 205 IPR035513 -
Pral1492g00001 211 PANTHER PECTINESTERASE INHIBITOR-LIKE 54 205 - -
Pral1492g00001 211 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 202 IPR035513 -
Pral1492g00001 211 Pfam Plant invertase/pectin methylesterase inhibitor 62 200 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1492g00001 Pral-Chr1492 3261 3928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1492g00001 63 205 Carbohydrate Esterase AT5G49180 24.516 5.29e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1492g00001 - - pcin:129301890 345.51