Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1489g00018 ATGCAACCTCACTTCTCCCCTACACCTGTGGATGCCCATGACAGAGCCACCGTGTTCCGCCCACTCTCGTTCGCCCCACCTCACATGCTTGCCTTCCATCTTGCATGGCTCAACCTCTTCTCTTGCTTCTTCTCGACCTTCTCCATCCCTCCCCTCCTCCCCGTCATCCGCCACGACCTCCAACTCACCCCCACTGACATCGGCAACGCCGGCATCGCCTCCTTCGTCGGCTCCATTTTCTCCCGCCTCCTCATGGGCCCCACCTGCGACCTCATTGGCCCCCGCATAGCCTCCGGCACTCTCTCCCTCATCACAGCACCTGTCATCCTCGCAACCGCTTTCGTGTCCACACCTCAATCATTCATCATCATTCGCTTCCTTGTGGGGTTTTCTCTCGCCAACTTTGTGTCCAGCCAGTTCTGGATGAGCTCCATGTTCTCCCCCTCCATAGTAGGCCTAGCAAACGGAGTCGCCGCCGGGTGGGCCAACGTGGGTTCGGGTGTGACCCAACTGGTTATGCCTCTCGTATACTCTCTCATCATCAACTTCAACGTACCGTCTTCCATTGCTTGGAGGCTTGCGTTTGTTGTTCCCGCCATTTTCCAAGCAATCACGGCAATACTGGTCTTGGCTTTCGGGCAAGACCTGCCTTCAGGGAGATACGTGCGTACCCAGACGCAGAAGGCTAAAGGAGAGAACGTACTCAAAATATTATTTGACGGCTTGTCTAATTACAGGGGGTGGGTTCTGGCTCTGCTTTATGGGTTCTCTTTCGGGGTGGAACTAACAACGGACAACATAATAGCTCAGTACTTCTATGATAGGTTTAACGTGAATATCGAAGTCGCCGGGAGTATTGCGGCGAGTTTTGGGATGGCGAATTTGTTCTCTCGGCCAATGGGAGGAGTGATTTCTGATGGGATGGGAAGGAAGTATGGCATGAGAGGCAGATTGTGGGGCCTGTGGGTCGTCCAAACGGCGGCCGGACTTCTGTGTGTTTTACTTGGACGCCTCAGCTCTCTCTGGAGTTCTATCCTTGTCATGTGCGCTTTCTCCGTTTTTGTTCAAGCCGCTTCTGGCCTCATATTTGGTGTCGTCCCTTTCGTTTCCACGAGATCGCTTGGAGTAATTTCAGGGATGACGGGAAGCGGAGGAACTATTGGGGCCGTGGTGACTCAAACGCTGTTGTTTTCAGGGGCCCACTTCTCCAAGCAAACAAGCATATCTCTGATGGGCATTATGATGGTATTGTGCACTCTTCCAGTGACGCTTTTGTATTTCCCTCAATGGGGAGGTATGTTCTGGGGCCCTTCATTAGTTCCCGATTCACCTGAAGAAAGTTGTTGCCTGCTTGATTAG 1359 0.5313 MQPHFSPTPVDAHDRATVFRPLSFAPPHMLAFHLAWLNLFSCFFSTFSIPPLLPVIRHDLQLTPTDIGNAGIASFVGSIFSRLLMGPTCDLIGPRIASGTLSLITAPVILATAFVSTPQSFIIIRFLVGFSLANFVSSQFWMSSMFSPSIVGLANGVAAGWANVGSGVTQLVMPLVYSLIINFNVPSSIAWRLAFVVPAIFQAITAILVLAFGQDLPSGRYVRTQTQKAKGENVLKILFDGLSNYRGWVLALLYGFSFGVELTTDNIIAQYFYDRFNVNIEVAGSIAASFGMANLFSRPMGGVISDGMGRKYGMRGRLWGLWVVQTAAGLLCVLLGRLSSLWSSILVMCAFSVFVQAASGLIFGVVPFVSTRSLGVISGMTGSGGTIGAVVTQTLLFSGAHFSKQTSISLMGIMMVLCTLPVTLLYFPQWGGMFWGPSLVPDSPEESCCLLD 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1489g00018 452 CDD MFS_NRT2_like 32 424 IPR044772 GO:0015112
Pral1489g00018 452 Gene3D MFS general substrate transporter like domains 28 223 IPR036259 -
Pral1489g00018 452 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 8 438 IPR044772 GO:0015112
Pral1489g00018 452 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 424 IPR020846 GO:0022857
Pral1489g00018 452 SUPERFAMILY MFS general substrate transporter 17 426 IPR036259 -
Pral1489g00018 452 FunFam Nitrate transporter 2.1 231 432 - -
Pral1489g00018 452 FunFam High affinity nitrate transporter 2.5 24 220 - -
Pral1489g00018 452 Gene3D MFS general substrate transporter like domains 231 431 IPR036259 -
Pral1489g00018 452 Pfam Major Facilitator Superfamily 36 390 IPR011701 GO:0022857|GO:0055085
Pral1489g00018 452 ProSitePatterns Sugar transport proteins signature 1. 301 316 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1489g00018 Pral-Chr1489 125011 126983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1489g00018 3 446 Inorganic Solute Cotransporters AT5G14570 62.924 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1489g00018 K02575 - qsa:O6P43_008930 696.812