Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1489g00005 ATGAATACGACACCGTTCATGGATAAGCAGATTATGGATCTAACCCAAGGATCGTCTTCGAGCAAGGATTTCATCGACCTGATGAGCCGTCCTAAGGAGGAAGAAAAGGCAGACGCAGAAGGTGAAGCTCGCCGTGGCAGCCACCACCAAATCGGTGGTAATGGGATTAAGGAGGATATCATTCCCAGTTACGATTTCCAGCCGATTCGCCCACTCGGAGCTTCGACCCAGTCTTCCAATCACGATTCCAGCCCTAATATGGGAGGGATTTCGAGGTCTTGGAATTCTGACTCCAAGTCTAACTTTTCCACCCCAATCCTTAGAAATTATAATTCTCTGGACTCTCTTGAACCTGCAAAAGTCACAGTGGAAAAGGATCAAAATGCCTTTGATGCTGCAATACTGTCTGAGATAGATCAAACCATGAAGAAGCATATGGACAATTTGCTTCATGTGCTGGAAGGCATCGGTGCAAGATTAACACAACTAGAAAGCAGAACCAACCATCTTGAAGATTCTGTGGATGAGTTGAAGGTGTCTGTTGGAAACAACCATGGTAGCACTGATGGGAAAATGAGACAGCTTGAGAATATCCTTAGAGAGGTGCAAATGGGTGTACAAGTTTTAAAGGATAAGCAAGATGTGATGGGAGCTCAACTGCAGCTGGCAAAGCTACAAGTGTCCAAGGTGGACCAACATTCAGAAACTCAGGCTAGTGTAACTACAGATCCTGTACAGCAAACTGCATCGGCTTCTCAGCAATTGCAACAACAGCTTCCTTCCCCTGTTAATCTTCCACAATCAGTTGCTGCGGTCCCTCACCCTAATGCTCCTCCTCAACCTCTGTCCCAACAGGGTGTGCCACCTCCAGTTCAACTTCCTAATCAATTTCCTCAGGCCCAAATTCCTTCTGTTCCTCAGCGAGAACCTTACTTCCAACCACCACCTCAATCTCACGAGACCCCAAATCAGCAATACCAATTGCCTTTATCTCAACAGCCTCTTCCTCCTCCTGGGGCACCTCCACAGCAGCAATATCAACAAAACCCTCAACCTCAGTACCCTCAGCCTGTACCTCATCCACCTCAACAGCAGCCATCACCTTCTCCTGTCAGTCCCCCGCCTCAACTCCCATCTTCAATGGGTCACCATGTGGAGGATGCGTCTTATATTCCTCCTCAGAATTATCCACCCAATGTCCGCCAACCACCATCCCAGCCACCACCCAGTGGGCCACCTCCTGCCCAGCAATTCTATGGACCGCCATCCCATGCCTTTGAACCGCTCTCTAGTAGATCTGGTTCAGGTTTTTCTTCTGGGTATAGTGCACCATCTCTACCTGCTGAGCCATATCATTACGGTGGATCGCCTCAGTATGCTGTGGCTCCTCCAAGTGGAGGAAGTGGTTACCCTCAGCTTCCTACTGCTCGTGTGCTGCCCCATGCATTGCCTACAGCGTCAGCGGCAAGTAGCAGTTCTGGATCTGGTGGAAGTGGAAATCGGGTCCCCATAGATGATGTGGTTGACAAAGTGGCAAGTATGGGATTCCCTAGAGACCATGTGAGGGCAACAGTTCGAAAGCTAACAGAGAATGGTCAAGCAGTTGACCTCAATGTAGTGCTGGATAAGCTTATGAACGAAAGTGATATCCAGCCAAGAGGGTGGTATGGTCGGTAG 1677 0.489 MNTTPFMDKQIMDLTQGSSSSKDFIDLMSRPKEEEKADAEGEARRGSHHQIGGNGIKEDIIPSYDFQPIRPLGASTQSSNHDSSPNMGGISRSWNSDSKSNFSTPILRNYNSLDSLEPAKVTVEKDQNAFDAAILSEIDQTMKKHMDNLLHVLEGIGARLTQLESRTNHLEDSVDELKVSVGNNHGSTDGKMRQLENILREVQMGVQVLKDKQDVMGAQLQLAKLQVSKVDQHSETQASVTTDPVQQTASASQQLQQQLPSPVNLPQSVAAVPHPNAPPQPLSQQGVPPPVQLPNQFPQAQIPSVPQREPYFQPPPQSHETPNQQYQLPLSQQPLPPPGAPPQQQYQQNPQPQYPQPVPHPPQQQPSPSPVSPPPQLPSSMGHHVEDASYIPPQNYPPNVRQPPSQPPPSGPPPAQQFYGPPSHAFEPLSSRSGSGFSSGYSAPSLPAEPYHYGGSPQYAVAPPSGGSGYPQLPTARVLPHALPTASAASSSSGSGGSGNRVPIDDVVDKVASMGFPRDHVRATVRKLTENGQAVDLNVVLDKLMNESDIQPRGWYGR 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1489g00005 558 MobiDBLite consensus disorder prediction 331 345 - -
Pral1489g00005 558 Pfam UBA-like domain (DUF1421) 504 548 IPR010820 -
Pral1489g00005 558 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 556 - -
Pral1489g00005 558 MobiDBLite consensus disorder prediction 70 97 - -
Pral1489g00005 558 MobiDBLite consensus disorder prediction 26 47 - -
Pral1489g00005 558 MobiDBLite consensus disorder prediction 428 442 - -
Pral1489g00005 558 MobiDBLite consensus disorder prediction 235 265 - -
Pral1489g00005 558 MobiDBLite consensus disorder prediction 396 419 - -
Pral1489g00005 558 MobiDBLite consensus disorder prediction 235 504 - -
Pral1489g00005 558 Coils Coil 160 180 - -
Pral1489g00005 558 MobiDBLite consensus disorder prediction 1 97 - -
Pral1489g00005 558 Coils Coil 192 212 - -
Pral1489g00005 558 MobiDBLite consensus disorder prediction 352 377 - -
Pral1489g00005 558 MobiDBLite consensus disorder prediction 485 499 - -
Pral1489g00005 558 MobiDBLite consensus disorder prediction 272 296 - -
Pral1489g00005 558 MobiDBLite consensus disorder prediction 1 25 - -
Pral1489g00005 558 PRINTS Proline rich extensin signature 303 315 - -
Pral1489g00005 558 PRINTS Proline rich extensin signature 355 371 - -
Pral1489g00005 558 PRINTS Proline rich extensin signature 274 290 - -
Pral1489g00005 558 PRINTS Proline rich extensin signature 393 418 - -
Pral1489g00005 558 PRINTS Proline rich extensin signature 332 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1489g00005 Pral-Chr1489 62863 66741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1489g00005 6 312 Trihelix Transcription Factor Family AT5G14540 44.785 2.34e-67 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1489g00005 - - qsa:O6P43_008925 623.624