Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1486g00013 ATGGAGTGGTACTTCTACAGTCCAAGGGATAGAAAGTACCCAAATGGTTCAAGAACTAACAGGGCCACAAGATCTGGTTATTGGAAAGCCACAGGGAAAGATAGGCCAGTGAGTTCTCAAAAGCGATCTGTTGGGGTGAAGAAGACGTTGGTGTATTATAGAGGTAGAGCTCCTCATGGCATAAGAACCAATTGGCTTATGCATGAGTATCGCCTCATTGATTCAGAACCAGCAAGTGTTTTCTCATCTTTGAAGGATTCATACTCATTGTGTCGCATCTTCAAGAAGACGATCCAAACCTCGGAATCACCTAAAGAAAAAGACAAAGCTAAGGAAGCAAAGAAGGAATCTGTAGGATCAGCAGAAGAGGAAGATGATACAGTTGCAAATTATCATCATGATCATGCTAATAATAAATTTCCTAATTGTGATGCTTCTTGTTCGGATCTCACTCAAGGAACACATACTGAAACTGGTATGGTAGATGATTTTCAAGCACAATTCACTTGTGATGAAGCAAACAGCGCAGCTAAGATCACGTATTCTCAGCTGGGCATAATGGAGGACCCATCAAATCTGTTTCAGGATATGGAGGTACCTACTTATGGAAGCATGCATGATGAAGTTGCAGCATACACAGTACCGTTGGAGCATTTGGAGATGGAAGATTTGCCTCAAATAAAATTGCCAGAGACAAAACCATCATTAATGAAGCCTGAAATAATTAGTGGCCAATGCGTTTTATATGATAAATACAAGGACTGTACCTATGGAACCCTAGAAGAGATAATCTCTCTGTGTTCCTCGACATATACACAATTTTAA 825 0.4036 MEWYFYSPRDRKYPNGSRTNRATRSGYWKATGKDRPVSSQKRSVGVKKTLVYYRGRAPHGIRTNWLMHEYRLIDSEPASVFSSLKDSYSLCRIFKKTIQTSESPKEKDKAKEAKKESVGSAEEEDDTVANYHHDHANNKFPNCDASCSDLTQGTHTETGMVDDFQAQFTCDEANSAAKITYSQLGIMEDPSNLFQDMEVPTYGSMHDEVAAYTVPLEHLEMEDLPQIKLPETKPSLMKPEIISGQCVLYDKYKDCTYGTLEEIISLCSSTYTQF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1486g00013 274 MobiDBLite consensus disorder prediction 101 125 - -
Pral1486g00013 274 Gene3D NAC domain 1 100 IPR036093 GO:0003677|GO:0006355
Pral1486g00013 274 ProSiteProfiles NAC domain profile. 1 96 IPR003441 GO:0003677|GO:0006355
Pral1486g00013 274 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 145 - -
Pral1486g00013 274 Pfam No apical meristem (NAM) protein 2 72 IPR003441 GO:0003677|GO:0006355
Pral1486g00013 274 SUPERFAMILY NAC domain 2 96 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1486g00013 Pral-Chr1486 30476 33103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1486g00013 1 265 NAC Transcription Factor Family AT1G54330 44.891 1.24e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1486g00013 NAM 7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1486g00013 - - gmx:100808325 320.857