Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1486g00012 ATGGCTCCAGCGAGTACTCTCCCACCTGGATTTCGGTTCCATCCAACAGATGAAGAACTTGTTTCTTACTACCTAGAAAGAAAAATAACAGGTCGCTCAATAGAGCTCCATATAATCCCTGAAGTTGATCTATACAAGCATGAACCTTGGGATTTGCCAGACAAGTCATTCTTGCCAAGTAAAGATATGGAGTGGTACTTCTACAGTCCAAGGGATAGAAAGTACCCAAATGGTTCAAGAACTAACAGGGCCACAAGATCTGGTTATTGGAAAGCCACAGGGAAAGATAGGCCAGTGAGTTCTCAAAAGCGATCTGTTGGGGTGAAGAAGACGTTGGTGTATTATAGAGGTAGAGCTCCTCATGGCATAAGAACCAATTGGCTTATGCATGAGTATCGCCTCATTGATTCAGAACCAGCAAGTGTTTTCTCATCTTTGAAGGATTCATACTCATTGTGTCGCATCTTCAAGAAGACGATCCAAACCTCGGAATCACCTAAAGAAAAAGACAAAGCTAAGGAAGCAAAGAAGGAATCTGTAGGATCAGCAGAAGAGGAAGATGATACAGTTGCAAATTATCATCATGATCATGCTAATAATAAATTTCCTAATTGTGATGCTTCTTGTTCGGATCTCACTCAAGGAACACATACTGAAACTGGTATGGTAGATGATTTTCAAGCACAATTCACTTGTGATGAAGCAAACAGCGCAGCTAAGATCACGTATTCTCAGCTGGGCATAATGGAGGACCCATCAAATCTGTTTCAGGATATGGAGGTACCTACTTATGGAAGCATGCATGATGAAGTTGCAGCATACACAGTACCGTTGGAGCATTTGGAGATGGAAGATTTGCCTCAAATAAAATTGCCAGAGACAAAACCATCATTAATGAAGCCTGAAATAATTAGTGGCCAATGCGTTTTATATGATAAATACAAGGACTGTACCTATGGAACCCTAGAAGAGATAATCTCTCTGTGTTCCTCGACATATACACAATTTTAA 1011 0.4065 MAPASTLPPGFRFHPTDEELVSYYLERKITGRSIELHIIPEVDLYKHEPWDLPDKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRSGYWKATGKDRPVSSQKRSVGVKKTLVYYRGRAPHGIRTNWLMHEYRLIDSEPASVFSSLKDSYSLCRIFKKTIQTSESPKEKDKAKEAKKESVGSAEEEDDTVANYHHDHANNKFPNCDASCSDLTQGTHTETGMVDDFQAQFTCDEANSAAKITYSQLGIMEDPSNLFQDMEVPTYGSMHDEVAAYTVPLEHLEMEDLPQIKLPETKPSLMKPEIISGQCVLYDKYKDCTYGTLEEIISLCSSTYTQF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1486g00012 336 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Pral1486g00012 336 MobiDBLite consensus disorder prediction 163 187 - -
Pral1486g00012 336 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
Pral1486g00012 336 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Pral1486g00012 336 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 207 - -
Pral1486g00012 336 Pfam No apical meristem (NAM) protein 8 134 IPR003441 GO:0003677|GO:0006355
Pral1486g00012 336 FunFam Nac domain-containing protein 86 16 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1486g00012 Pral-Chr1486 30396 33103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1486g00012 1 327 NAC Transcription Factor Family AT1G54330 50.595 7.33e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1486g00012 NAM 3.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1486g00012 - - gmx:100808325 430.254