Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1485g00006 ATGTTAGACGAGTGCATGTTATCTTACTCAAACACTTCAATATTAGACAACGCGGTAGTCTTCTATATGTGGGACGAACACTTGGCAAGAAATTGGAATCAGTACAATCAGGTTCTTATGAGTTTGCTGCGGACTTTAAGTAGCATAGCTGCTTCTGGTGACTCCAGTCTAAAATTTGCTGCAGGACATGAAGAAGGACCTAACCTTCAAACCATATATGCTGTTGTTCAGTGCACGCCTAATTTGAGCGAGTCAGAATGCAAAAGCTGCTTGCTTTGGGCCATCTCAAAAATTCCAGAGCGCGGTAAAGATAGGCTAGGTGGTAGAGTTATTGTACCCAATTGTAACTTAAGATATGAAAGTGGCCGCTTCTATGCAATTACAGCTGATGTAACTTTTTCAGCTCCGCCGACCCTACTGTCTCCTCCCCCATCCACCAACACAACCTTTTCATCACCTCCTCCATCTGCCGCCACAAGATCCTCGAAAGATGATTCAACCGAACTTACTGAGGAGTCAATACAATTTGAATTTGACACCATCAAAGTTGCTACAAATAACTTCTCTGATGAAAACAAGCTTGGACAAGGAGGATTTGGACCAGTTTACAAGGGCATGCTCTTCGAAGGGAAAGAGATAGCAGTAAAAAGGTTGTCTAGTAATTCTGGACAAGGGGATATTGAATTTAAGAATGAAGTACAATTAATGGTCAGGCTTCAACACCGAAATTTAGTTAGACTCCTTGGTTTTTGTTTGAAACAAAAGGAACGACTTCTAGTATATGAGCTTCTTCCTAATAAAAGTCTCGATCACTTTTTATTTGATCCTATTAGACGTGCACAACTAAGATGGAAAACACGTTACAAAATTATTGGAGGAATTGCAAGTGGCCTTCTTTACCTTCATGAAGAATCTCAACAACGAATTGTTCATCGTGATCTTAAAACAAGTAATATTCTCTTAGATGCGGATATGAATCCTAAGATTTCAGATTTTGGCATGGCAAGATTATTTGTTACAGATCAAACTCAAGCCAACACAGACAGAGTTGCGGGAACCTATGGGTATATGGCGCCAGAGTATGCAAGACATGGAAGATTCTCAACAAAGTCTGATGTCTTCAGTTTTGGTGTATTGATTCTAGAGATTGTGAGTGGCCAGAAGAATGGTGGCTTTCATAATTTGGAGAATGTAGAGCATCTACCAAGTTTGGCATGGAAAAGCTGGAGGAAAGGCAAAGCCTCTAACATTATAGATCCCACGTTAAGAGATGGTTCAAGAAATGAAATAATGAGATGCCTTCACATTGGTTTACTATGTGTTCAAGAAAAAGCTGCAGACAGACCAACCTTGGCTTCCCTTGTGCTTATGCTCAGCAGCCACTCCTTCTCACTTCAAGAACCCATGAAACCTGCATTTTTTATGAATGACACAAGTTTATCTGGCAGAAACTCAAGGGATTACAGAGCTGTGTCAACAAGCTCCAGCAAGAAAAATAGTAAATCTGCAGAATCATTATCAGTGAATGAGGCCTCAATAACTGATATATATCCTCGATAA 1560 0.4019 MLDECMLSYSNTSILDNAVVFYMWDEHLARNWNQYNQVLMSLLRTLSSIAASGDSSLKFAAGHEEGPNLQTIYAVVQCTPNLSESECKSCLLWAISKIPERGKDRLGGRVIVPNCNLRYESGRFYAITADVTFSAPPTLLSPPPSTNTTFSSPPPSAATRSSKDDSTELTEESIQFEFDTIKVATNNFSDENKLGQGGFGPVYKGMLFEGKEIAVKRLSSNSGQGDIEFKNEVQLMVRLQHRNLVRLLGFCLKQKERLLVYELLPNKSLDHFLFDPIRRAQLRWKTRYKIIGGIASGLLYLHEESQQRIVHRDLKTSNILLDADMNPKISDFGMARLFVTDQTQANTDRVAGTYGYMAPEYARHGRFSTKSDVFSFGVLILEIVSGQKNGGFHNLENVEHLPSLAWKSWRKGKASNIIDPTLRDGSRNEIMRCLHIGLLCVQEKAADRPTLASLVLMLSSHSFSLQEPMKPAFFMNDTSLSGRNSRDYRAVSTSSSKKNSKSAESLSVNEASITDIYPR 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1485g00006 519 FunFam Cysteine-rich receptor-like protein kinase 28 264 466 - -
Pral1485g00006 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Pral1485g00006 519 Pfam Protein tyrosine and serine/threonine kinase 191 456 IPR001245 GO:0004672|GO:0006468
Pral1485g00006 519 FunFam Cysteine-rich receptor-like protein kinase 10 154 263 - -
Pral1485g00006 519 Gene3D Phosphorylase Kinase; domain 1 154 263 - -
Pral1485g00006 519 MobiDBLite consensus disorder prediction 483 504 - -
Pral1485g00006 519 Gene3D Transferase(Phosphotransferase) domain 1 264 471 - -
Pral1485g00006 519 MobiDBLite consensus disorder prediction 138 169 - -
Pral1485g00006 519 ProSiteProfiles Gnk2-homologous domain profile. 17 124 IPR002902 -
Pral1485g00006 519 FunFam Cysteine-rich receptor-like protein kinase 10 19 124 - -
Pral1485g00006 519 SUPERFAMILY Protein kinase-like (PK-like) 167 458 IPR011009 -
Pral1485g00006 519 Gene3D - 16 124 IPR038408 -
Pral1485g00006 519 SMART serkin_6 188 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1485g00006 519 ProSiteProfiles Protein kinase domain profile. 188 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1485g00006 519 CDD STKc_IRAK 194 458 - -
Pral1485g00006 519 Pfam Salt stress response/antifungal 33 121 IPR002902 -
Pral1485g00006 519 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1485g00006 Pral-Chr1485 19953 22728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1485g00006 5 519 Receptor kinase-like Gene Family AT4G21410 43.881 6.08e-163 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1485g00006 PK_Tyr_Ser-Thr 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1485g00006 - - pcin:129293328 603.208