Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1485g00004 ATGTTAGACGAGTGCATGTTATCTTACTCAAACACTTCAATATTAGACAACGCGGTAGTCTTCTATATGTGGGACGAACACTTGGCAAGAAATTGGAATCAGTACAATCAGGTTCTTATGAGTTTGCTGCGGACTTTAAGTAGCATAGCTGCTTCTGGTGACTCCAGTCTAAAATTTGCTGCAGGACATGAAGAAGGACCTAACCTTCAAACCATATATGCTGTTGTTCAGTGCACGCCTAATTTGAGCGAGTCAGAATGCAAAAGCTGCTTGCTTTGGGCCATCTCAAAAATTCCAGAGCGCGCTCCGCCGACCCTACTGTCTCCTCCCCCATCCACCAACACAACCTTTTCATCACCTCCTCCATCTGCCGCCACAAGATCCTCGAAAGGAAAGAAATCACAAACTATCATTGCCCTTGTTGTGTCAACTTCTGCAATGGTTATGCTGCTTATCTTTGCTTGGATCTGTGTAAGAGTGAGAAAGCAAGGAAGGAAATCTCCAAATGATTCAACCGAACTTACTGAGGAGTCAATACAATTTGAATTTGACACCATCAAAGTTGCTACAAATAACTTCTCTGATGAAAACAAGCTTGGACAAGGAGGATTTGGACCAGTTTACAAGGGCATGCTCTTCGAAGGGAAAGAGATAGCAGTAAAAAGGTTGTCTAGTAATTCTGGACAAGGGGATATTGAATTTAAGAATGAAGTACAATTAATGGTCAGGCTTCAACACCGAAATTTAGTTAGACTCCTTGGTTTTTGTTTGAAACAAAAGGAACGACTTCTAGTATATGAGCTTCTTCCTAATAAAAGTCTCGATCACTTTTTATTTGATCCTATTAGACGTGCACAACTAAGATGGAAAACACGTTACAAAATTATTGGAGGAATTGCAAGTGGCCTTCTTTACCTTCATGAAGAATCTCAACAACGAATTGTTCATCGTGATCTTAAAACAAGTAATATTCTCTTAGATGCGGATATGAATCCTAAGATTTCAGATTTTGGCATGGCAAGATTATTTGTTACAGATCAAACTCAAGCCAACACAGACAGAGTTGCGGGAACCTATGGGTATATGGCGCCAGAGTATGCAAGACATGGAAGATTCTCAACAAAGTCTGATGTCTTCAGTTTTGGTGTATTGATTCTAGAGATTGTGAGTGGCCAGAAGAATGGTGGCTTTCATAATTTGGAGAATGTAGAGCATCTACCAAGTTTGGCATGGAAAAGCTGGAGGAAAGGCAAAGCCTCTAACATTATAGATCCCACGTTAAGAGATGGTTCAAGAAATGAAATAATGAGATGCCTTCACATTGGTTTACTATGTGTTCAAGAAAAAGCTGCAGACAGACCAACCTTGGCTTCCCTTGTGCTTATGCTCAGCAGCCACTCCTTCTCACTTCAAGAACCCATGAAACCTGCATTTTTTATGAATGACACAAGTTTATCTGGCAGAAACTCAAGGGATTACAGAGCTGTGTCAACAAGCTCCAGCAAGAAAAATAGTAAATCTGCAGAATCATTATCAGTGAATGAGGCCTCAATAACTGATATATATCCTCGATAA 1575 0.4032 MLDECMLSYSNTSILDNAVVFYMWDEHLARNWNQYNQVLMSLLRTLSSIAASGDSSLKFAAGHEEGPNLQTIYAVVQCTPNLSESECKSCLLWAISKIPERAPPTLLSPPPSTNTTFSSPPPSAATRSSKGKKSQTIIALVVSTSAMVMLLIFAWICVRVRKQGRKSPNDSTELTEESIQFEFDTIKVATNNFSDENKLGQGGFGPVYKGMLFEGKEIAVKRLSSNSGQGDIEFKNEVQLMVRLQHRNLVRLLGFCLKQKERLLVYELLPNKSLDHFLFDPIRRAQLRWKTRYKIIGGIASGLLYLHEESQQRIVHRDLKTSNILLDADMNPKISDFGMARLFVTDQTQANTDRVAGTYGYMAPEYARHGRFSTKSDVFSFGVLILEIVSGQKNGGFHNLENVEHLPSLAWKSWRKGKASNIIDPTLRDGSRNEIMRCLHIGLLCVQEKAADRPTLASLVLMLSSHSFSLQEPMKPAFFMNDTSLSGRNSRDYRAVSTSSSKKNSKSAESLSVNEASITDIYPR 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1485g00004 524 Gene3D Transferase(Phosphotransferase) domain 1 269 476 - -
Pral1485g00004 524 Pfam Protein tyrosine and serine/threonine kinase 196 461 IPR001245 GO:0004672|GO:0006468
Pral1485g00004 524 FunFam Cysteine-rich receptor-like protein kinase 28 269 471 - -
Pral1485g00004 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672|GO:0006468
Pral1485g00004 524 ProSiteProfiles Protein kinase domain profile. 193 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1485g00004 524 SUPERFAMILY Protein kinase-like (PK-like) 167 463 IPR011009 -
Pral1485g00004 524 CDD STKc_IRAK 199 463 - -
Pral1485g00004 524 SMART serkin_6 193 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1485g00004 524 Gene3D - 16 106 IPR038408 -
Pral1485g00004 524 FunFam Cysteine-rich receptor-like protein kinase 10 158 268 - -
Pral1485g00004 524 Pfam Salt stress response/antifungal 33 97 IPR002902 -
Pral1485g00004 524 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 521 - -
Pral1485g00004 524 ProSiteProfiles Gnk2-homologous domain profile. 17 124 IPR002902 -
Pral1485g00004 524 MobiDBLite consensus disorder prediction 488 509 - -
Pral1485g00004 524 Gene3D Phosphorylase Kinase; domain 1 156 268 - -
Pral1485g00004 524 MobiDBLite consensus disorder prediction 104 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1485g00004 Pral-Chr1485 19953 22728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1485g00004 5 524 Receptor kinase-like Gene Family AT4G21410 45.070 2.39e-162 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1485g00004 PK_Tyr_Ser-Thr 3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1485g00004 - - pcin:129293337 645.58