Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1485g00003 ATGGTTATGCTGCTTATCTTTGCTTGGATCTGTGTAAGAGTGAGAAAGCAAGGAAGGAAATCTCCAAATGATTCAACCGAACTTACTGAGGAGTCAATACAATTTGAATTTGACACCATCAAAGTTGCTACAAATAACTTCTCTGATGAAAACAAGCTTGGACAAGGAGGATTTGGACCAGTTTACAAGGGCATGCTCTTCGAAGGGAAAGAGATAGCAGTAAAAAGGTTGTCTAGTAATTCTGGACAAGGGGATATTGAATTTAAGAATGAAGTACAATTAATGGTCAGGCTTCAACACCGAAATTTAGTTAGACTCCTTGGTTTTTGTTTGAAACAAAAGGAACGACTTCTAGTATATGAGCTTCTTCCTAATAAAAGTCTCGATCACTTTTTATTTGATCCTATTAGACGTGCACAACTAAGATGGAAAACACGTTACAAAATTATTGGAGGAATTGCAAGTGGCCTTCTTTACCTTCATGAAGAATCTCAACAACGAATTGTTCATCGTGATCTTAAAACAAGTAATATTCTCTTAGATGCGGATATGAATCCTAAGATTTCAGATTTTGGCATGGCAAGATTATTTGTTACAGATCAAACTCAAGCCAACACAGACAGAGTTGCGGGAACCTATGGGTATATGGCGCCAGAGTATGCAAGACATGGAAGATTCTCAACAAAGTCTGATGTCTTCAGTTTTGGTGTATTGATTCTAGAGATTGTGAGTGGCCAGAAGAATGGTGGCTTTCATAATTTGGAGAATGTAGAGCATCTACCAAGTTTGGCATGGAAAAGCTGGAGGAAAGGCAAAGCCTCTAACATTATAGATCCCACGTTAAGAGATGGTTCAAGAAATGAAATAATGAGATGCCTTCACATTGGTTTACTATGTGTTCAAGAAAAAGCTGCAGACAGACCAACCTTGGCTTCCCTTGTGCTTATGCTCAGCAGCCACTCCTTCTCACTTCAAGAACCCATGAAACCTGCATTTTTTATGAATGACACAAGTTTATCTGGCAGAAACTCAAGGGATTACAGAGCTGTGTCAACAAGCTCCAGCAAGAAAAATAGTAAATCTGCAGAATCATTATCAGTGAATGAGGCCTCAATAACTGATATATATCCTCGATAA 1137 0.3843 MVMLLIFAWICVRVRKQGRKSPNDSTELTEESIQFEFDTIKVATNNFSDENKLGQGGFGPVYKGMLFEGKEIAVKRLSSNSGQGDIEFKNEVQLMVRLQHRNLVRLLGFCLKQKERLLVYELLPNKSLDHFLFDPIRRAQLRWKTRYKIIGGIASGLLYLHEESQQRIVHRDLKTSNILLDADMNPKISDFGMARLFVTDQTQANTDRVAGTYGYMAPEYARHGRFSTKSDVFSFGVLILEIVSGQKNGGFHNLENVEHLPSLAWKSWRKGKASNIIDPTLRDGSRNEIMRCLHIGLLCVQEKAADRPTLASLVLMLSSHSFSLQEPMKPAFFMNDTSLSGRNSRDYRAVSTSSSKKNSKSAESLSVNEASITDIYPR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1485g00003 378 FunFam Cysteine-rich receptor-like protein kinase 28 123 325 - -
Pral1485g00003 378 SUPERFAMILY Protein kinase-like (PK-like) 21 317 IPR011009 -
Pral1485g00003 378 Gene3D Phosphorylase Kinase; domain 1 10 122 - -
Pral1485g00003 378 SMART serkin_6 47 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1485g00003 378 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 375 - -
Pral1485g00003 378 Gene3D Transferase(Phosphotransferase) domain 1 123 331 - -
Pral1485g00003 378 MobiDBLite consensus disorder prediction 342 363 - -
Pral1485g00003 378 FunFam Cysteine-rich receptor-like protein kinase 10 12 122 - -
Pral1485g00003 378 CDD STKc_IRAK 53 317 - -
Pral1485g00003 378 ProSiteProfiles Protein kinase domain profile. 47 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1485g00003 378 Pfam Protein tyrosine and serine/threonine kinase 50 315 IPR001245 GO:0004672|GO:0006468
Pral1485g00003 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1485g00003 Pral-Chr1485 19953 22728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1485g00003 31 378 Receptor kinase-like Gene Family AT4G21410 56.818 4.75e-142 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1485g00003 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1485g00003 - - pcin:129293337 627.091