Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1484g00004 ATGGAGCCCGAGATGCTTGAGCCCTCTTGGTCATTCTATGGAGGCATAAGCTCAATTTTTGATCAAGTTGAGTCTTTTGACTTCAACATGGATACTTCAGTGTTCACTGCTTCAGAGGATACTTGTTCTGAGATTGCTTCCAATCTCCCCTTTCCTTCTACCATCTTCCTCGATAATCATGTCTACTGTACAATTGATGAGAACAGCCTTCAATTCCCATCATTGATTGATGATTTCTCCATGGATCTTGATGGTTTTGATCCCACTTTGAGTTCTCAAAGTCTGGCAAACCATGGATCTGCACAAGAGCTTGAGGGAAGCTTTCCTTCAAAGAAATTGTGTTTTGAGACAGAAGATGTTTGGACTTTGGAGTCCAACCCCATCTACGCAACCAGACATGTCTACACCATCAGTCATCATACCAGCAGAGGACGTGGAGATGGAGAACCAGTTGAGTCTTCCTCATGTTCTGGAAGCCATTGGAGAAGCCTTAGAGCAAGGACAGAACACACTTGCACAAGTGATTCTGAGACGCATCAGCCACAAAAGCAAGGGATTTTCATCAAACGGGAGGCCAGCAAAAGCTTCTTCCACGCTTTTAAGGCTATCTACCAAGGCCTCCCACACGGCAAAACTGCTCATTTTGCGGCCAATTCAGCAATTCTGGATTCCATACCAGCTGATTCAGAAGTCATACATTTAATAGACTTTGATATGGGAGACGGTTGTCAATGGCCTCCATTGGTGGAGGCTATCGCTCAACTGCACAAAACTTTGAAATTGACGTCAATAAGACACGAAGAAGAGGACAATCTTGATGCTGATTTTGCTTCAACCCAATGGAAATTTAAAGAAACCAGAAGGAAGCTCTATGAGCATGCCAAATCATGTGGTTTGAAGTTGAATGTGGAGGAAAAGAGTATAGAGGAATTGGCGACAGATCTCAAGAAATTGAACAAAAGGGGAGGGTATGGAAATGGAAAGAGAAGTTTTGTGACCTTCAATTGCAGGGCGGGTCTTCCACATATGGGGAGGGTCAGAAGTAGAAACCATGTCTTGGAATTCCTTAGGGTAGCAAAAGATTTCATCAAAAGCGCACCTTCTAACAGGGGAATTATAGCTTTTGGTGATGGAGAAGCCTGTGAGAAACTGAGAAACAGCAACAACTTCTTGTCATTCTTCAATGGCCATCTGGTGCATTACCATGCTTCTTTAGAATCCATAGAATCAAATTTCCCATCCCAATTCTCGGAGGCAAGAACAGCTATGGAGAATCCATTCGTAGCGCCGTGTATATCTTGTGAGGATTGGTTTCATAAGTGGGACGAGATGAGACAAGACGGAAATCTTCAAGCAGAAATAGATTTAGGGGGTGGAAGCTTGAGGGAAGAGACATTAACGGAAGTTGGAGAAATGCTGAGAGGAATGGAAGGGTGGTATGAGGTTAAGATTGAAGGCAATAATGGCAACGAGATGGTTCTGCAATGGAAAGGAACACAGCTTCTGAGAATTTCAATATGGGCAAATTGA 1530 0.434 MEPEMLEPSWSFYGGISSIFDQVESFDFNMDTSVFTASEDTCSEIASNLPFPSTIFLDNHVYCTIDENSLQFPSLIDDFSMDLDGFDPTLSSQSLANHGSAQELEGSFPSKKLCFETEDVWTLESNPIYATRHVYTISHHTSRGRGDGEPVESSSCSGSHWRSLRARTEHTCTSDSETHQPQKQGIFIKREASKSFFHAFKAIYQGLPHGKTAHFAANSAILDSIPADSEVIHLIDFDMGDGCQWPPLVEAIAQLHKTLKLTSIRHEEEDNLDADFASTQWKFKETRRKLYEHAKSCGLKLNVEEKSIEELATDLKKLNKRGGYGNGKRSFVTFNCRAGLPHMGRVRSRNHVLEFLRVAKDFIKSAPSNRGIIAFGDGEACEKLRNSNNFLSFFNGHLVHYHASLESIESNFPSQFSEARTAMENPFVAPCISCEDWFHKWDEMRQDGNLQAEIDLGGGSLREETLTEVGEMLRGMEGWYEVKIEGNNGNEMVLQWKGTQLLRISIWAN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1484g00004 509 Coils Coil 301 321 - -
Pral1484g00004 509 ProSiteProfiles GRAS family profile. 101 508 IPR005202 -
Pral1484g00004 509 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 182 433 IPR005202 -
Pral1484g00004 509 Pfam GRAS domain family 190 507 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1484g00004 Pral-Chr1484 60190 61786 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1484g00004 204 507 GRAS Transcription Factor Family AT2G01570 24.516 1.03e-08 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral1484g00004 GRAS 7.5e-29 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1484g00004 - - pcin:129291421 632.484