Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1484g00001 ATGGAGCCTGAGATAGAGCATTCTTGGTCGTCCTGTGAAGGCATAAGCTCAACTTTTGATCATGTTGAGTCTTTGGACTTCAACGTGGACGCTCTTTTGTTCCCCACTTCAGAGGATGCTTCTTCTGGAGTCTTCTGCACTGATCATGTCTATTTCCCTGTTGATGAACTCCCATCATTGATTGATGATTTCTCCATGGATCTTGATGCTTTTGATCCCACTTTGAGTTCTCTAAGTCCGGGTATTTTTCATGGATGCCCTGAAGAAGGTGAGGGAATAAGCTTTGCTTCCCAGAACCCGTGTTTTCAGAGAGATGTTTGGAGTCCAACCACATCGAAGCAATCAGGCATGTCTACAGTAGTACAAGCACCACCATCACTGATCATACTAGGAGAAGACATGGAGATGGAGAACCAGTTGAGTCTTCCTCATCTTCTGGAAGCCGTTGGAGAAGTCTTAGAGCAAGGACAGAACACACTTGCACAAGTGATTCTGAGACGCATCAGCCACAAAGTAAGCCCTCTTGGTGATCCCCTTGAACGTCTGGCATTCATTTTGTCCCAAAATCATGATGATGCAGATCAAGGGAGTTTCATCAAACAGGAGGCCTACAGGAGCTTCCGCGACTTTTTCAAGGCTATCTACCAAGGCCTCCCACATGGAAGAATTGCTCATTTTGCAGCCAATTCAGTAATTCTAGGATCCATACCAGCTGATTCAGAAGTGATACATATAATAGACTTTGATATGGGAGAAGGGGGTCAATGGCCTCCATTGATGGAGGCTATTGCTCAACAGCACAAAACTTTGAAACTGACTGTTATGACATTGGAAGAAGAGGAGAGTCCAGATATTGGTTATGTTTCCACTCAATGGAAATTTGAAGAAATCAGAAGGAAGCTCTATGAACACGCCAAATCATCTGGTTTGAAGTTGAAGGTGGAGGAACAGAGGATCGAGGAATTGGTGACAGAGCTTAAGAAATTGAACAAAAGGAGTGGGCATGGAAATGGAAAGAGAAATTTCGTGGCCTTCAATTGCATGGCGGGTCTTCCACATATGGGAAGGGTCAGAAGTAGGAGACATGTCTTGGAATTTCTACAAGTAGCAAAGGATTTCATCAAAAGCTCAACTGCCAACAGGGGAATTATATCTTTTGGTGATGGAGAAGCCTGTGAGAAACTGAGAAACAGCACCGATTTCATGTCCTTCTTTAATGGCCATTTGGAGCATTACCATGCTTTATTAGAATCCGTAGAATCAAATTTCCCATTCCAATTCTCAGAGGCAAGAACAGCTATGGAGAATCTATTCGTGGCGCCATATATATCATGTGAGGATTGGCTTCGGAGGTGGGAGGAGATGAGACAATGTGGGAATGTTCAATCAGAAATAGAGTTAGGGGGTGGAAGCTTGAGGGAGGAGACATTAATGGAAGTAGGAGAAATGTTGGGACGAATGCAAGGGTCGTACGAGGTTAAGATTGAAGGCAATAATGGCAATGAAATGGTTCTGCAATGGAAAGGGACGCAGCTTCTGAGAATTTCAACGCGGGCAAATTAA 1563 0.4395 MEPEIEHSWSSCEGISSTFDHVESLDFNVDALLFPTSEDASSGVFCTDHVYFPVDELPSLIDDFSMDLDAFDPTLSSLSPGIFHGCPEEGEGISFASQNPCFQRDVWSPTTSKQSGMSTVVQAPPSLIILGEDMEMENQLSLPHLLEAVGEVLEQGQNTLAQVILRRISHKVSPLGDPLERLAFILSQNHDDADQGSFIKQEAYRSFRDFFKAIYQGLPHGRIAHFAANSVILGSIPADSEVIHIIDFDMGEGGQWPPLMEAIAQQHKTLKLTVMTLEEEESPDIGYVSTQWKFEEIRRKLYEHAKSSGLKLKVEEQRIEELVTELKKLNKRSGHGNGKRNFVAFNCMAGLPHMGRVRSRRHVLEFLQVAKDFIKSSTANRGIISFGDGEACEKLRNSTDFMSFFNGHLEHYHALLESVESNFPFQFSEARTAMENLFVAPYISCEDWLRRWEEMRQCGNVQSEIELGGGSLREETLMEVGEMLGRMQGSYEVKIEGNNGNEMVLQWKGTQLLRISTRAN 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1484g00001 520 Coils Coil 260 280 - -
Pral1484g00001 520 ProSiteProfiles GRAS family profile. 133 519 IPR005202 -
Pral1484g00001 520 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 134 455 IPR005202 -
Pral1484g00001 520 Coils Coil 312 332 - -
Pral1484g00001 520 Pfam GRAS domain family 144 516 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1484g00001 Pral-Chr1484 4333 5895 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1484g00001 75 517 GRAS Transcription Factor Family AT1G66350 24.078 2.83e-14 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral1484g00001 GRAS 5.5e-36 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1484g00001 - - pcin:129291421 733.406