Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1482g00006 ATGGAGGTTCCCTCCGCCGTTCAGCCCCTTTCATCCGCCCCACCGCCACAAACCCCTCATCTCAACTATCCCGAGTCCGTCGACTCCTCTCCTCGATCCCGGAACACTGATTCATGGGATGAGCCTGTCCCTCCGGCCGCCGCAGCCGCGGCCTCCTCCAAACTTCGGTTCATGTGCAGCTATGGTGGCCACATCGTCCCTCGTCCCCATGATAAGTCCCTCTGTTACGTTGGTGGGGAAACGCGTATCGTTGTTGTTGAACGTAACACCTCCCTTTCTGACCTTTCCTCTCGTCTCTCTAAAACCTTCCTCAACGGCCGTCCCTTTACTCTCAAGTACTTGCTTCCCACTGAAGACCTTGATTCTCTTATTTCTGTGACCACCGATGAAGACCTCGATAACATGATCGACGAGTACGATCGAATTTCTAATTCGTCACTGAAACCCTCTAGAATCCGCCTCTTCTTGTTCACGGCGAAGCCCGATTCGACCCAATCGATACCCATAATTAACAGCTCCGCTAAGTCAGAGGATTGGTTTCTGGGTATGCTTAATAGAGGGTTTTCGGATTCTGGTTCTGTTAATTTGTTGATGGGTTTTGATGATGAGCTTGGTGCGGGCAATCTGGATGGGGGTTCGAAAGATGTCGAGCCTGTGAGTTCTGGATCTTTTGGAAATGGCAAGAGTGCGAAGCAGCATGGTCAGGATGTTCACTCTGTGCCCGATTCACCTATGCTGGAAACCACATCTTCCTTTGGGTCCACTTCTTCATCGCCGTCGGTGGCGAATTTGCCGCCAATTCGGGTTCATATTGATGATGGTAGTGGTGGGGGAGCAAGGGTACAGGATCAGAAGGCGGTGGGGATTGAGGATCAGCTCGCTCAAATGGGTGTGGGTGGCGGACAGAAGCAAGATGAGGGTTTTCTGATGTCTTCACCTCCTACTATGCCGGCATCCACCGTCCCGGCCGGCGTGCCTGTTGGCTCCTCGGTCCCTCCCGGCGAATACCAGAATCGTGTTGTCTCTGATGATGAGAGATCAGACTATGGAGTCCTTGGGGGTTACAGGAAACCTCCCCCACCGCAGCCACAGACGGTGCCTCAGCCTCAGATTCTGCATACACAATTGCAGCAGAAGCCGACTGGAGGCGTTGATCTGCCTTCTCCAGATTCAGTTTCAAGTGACAGTAGTATGAAAAATGCAATGTCGCGCCCACAACCTATGGTCTATCAAGACCAAGCCCAGCTCCAAATTCCCTCAGGAGCTGCGAGGGTTCCTAGTAATCAGGTTGATCCGAAACTGATGTCTGATTCTCATGGTCGGATCCAAATGCAGCAACAAGTATTGGAGCAGGGATATGTTTTGCAACAACAATTTGATCATCATCAACAACAACAACAACAACCACCTCAACAGCAGCACCAATTTATACATGGAACACAGCAACAAGTACAGGAAGCAGGATATGTATTACAACCTCAATTTGATCAACAACAGCAACAATTTATACATGGCACACATTTCATTCACCATGCCCCTTCTGGTGCTGCGCCACTGTCTGCATTTTATCCTGTATATCCTTCCCAGCAGCAGATTCATCCCCAGCATCATCATCAGCTTGAACAGCAGTATCAGGTTTACTATGTTCCCAGCAGACAGACCCAACCTTACAACTTGTCTTCACAGCAGCCTAATATTAGTGAACCTCCTGCAACAATTCCTTCTAACCGCGCCCAGACAACACAGAATCCTGCTTTGGTTCAGCCATCTGCAGCTTATAACCCCATCAGAAATGCTCCGGTGCCTAAATCTGAAATGACAGCAGGTGCATATAGAACAGCATATTCGGCCACCCCTCAAGTGGTTCAAGTTGCTTCTGGTCAGCCTCAGCAGCAATTTGTTGCCTATTCCCAGTATCATCATCCATCTCAGGCTGCTGCCCCCAATTCTGCTGCCTCGGCTAGTTATGCTTACGAGTATGCAGATCCTGCTCACGCCCAGATATACTTCTCTCAGCCTCTGGCACCCACAATGCCTTCACAGTACCAAACTATGACGGGTGCTGCCGCTGCAGGACATCCAGATGTTTCTGCCCAGCCACCCTCAGACAGCATGAAGCAGCAGATAAGAACATCACAGCCACAGTAA 2148 0.5042 MEVPSAVQPLSSAPPPQTPHLNYPESVDSSPRSRNTDSWDEPVPPAAAAAASSKLRFMCSYGGHIVPRPHDKSLCYVGGETRIVVVERNTSLSDLSSRLSKTFLNGRPFTLKYLLPTEDLDSLISVTTDEDLDNMIDEYDRISNSSLKPSRIRLFLFTAKPDSTQSIPIINSSAKSEDWFLGMLNRGFSDSGSVNLLMGFDDELGAGNLDGGSKDVEPVSSGSFGNGKSAKQHGQDVHSVPDSPMLETTSSFGSTSSSPSVANLPPIRVHIDDGSGGGARVQDQKAVGIEDQLAQMGVGGGQKQDEGFLMSSPPTMPASTVPAGVPVGSSVPPGEYQNRVVSDDERSDYGVLGGYRKPPPPQPQTVPQPQILHTQLQQKPTGGVDLPSPDSVSSDSSMKNAMSRPQPMVYQDQAQLQIPSGAARVPSNQVDPKLMSDSHGRIQMQQQVLEQGYVLQQQFDHHQQQQQQPPQQQHQFIHGTQQQVQEAGYVLQPQFDQQQQQFIHGTHFIHHAPSGAAPLSAFYPVYPSQQQIHPQHHHQLEQQYQVYYVPSRQTQPYNLSSQQPNISEPPATIPSNRAQTTQNPALVQPSAAYNPIRNAPVPKSEMTAGAYRTAYSATPQVVQVASGQPQQQFVAYSQYHHPSQAAAPNSAASASYAYEYADPAHAQIYFSQPLAPTMPSQYQTMTGAAAAGHPDVSAQPPSDSMKQQIRTSQPQ 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1482g00006 715 CDD PB1_UP2 58 157 - -
Pral1482g00006 715 MobiDBLite consensus disorder prediction 459 480 - -
Pral1482g00006 715 MobiDBLite consensus disorder prediction 242 263 - -
Pral1482g00006 715 SUPERFAMILY CAD & PB1 domains 70 166 - -
Pral1482g00006 715 MobiDBLite consensus disorder prediction 680 715 - -
Pral1482g00006 715 PANTHER OS05G0427100 PROTEIN-RELATED 23 498 - -
Pral1482g00006 715 MobiDBLite consensus disorder prediction 700 715 - -
Pral1482g00006 715 MobiDBLite consensus disorder prediction 209 282 - -
Pral1482g00006 715 Pfam PB1 domain 70 157 IPR000270 GO:0005515
Pral1482g00006 715 ProSiteProfiles PB1 domain profile. 54 157 IPR000270 GO:0005515
Pral1482g00006 715 SMART PB1_new 69 159 IPR000270 GO:0005515
Pral1482g00006 715 MobiDBLite consensus disorder prediction 22 37 - -
Pral1482g00006 715 MobiDBLite consensus disorder prediction 1 45 - -
Pral1482g00006 715 Gene3D - 74 159 - -
Pral1482g00006 715 MobiDBLite consensus disorder prediction 298 403 - -
Pral1482g00006 715 MobiDBLite consensus disorder prediction 368 403 - -
Pral1482g00006 715 MobiDBLite consensus disorder prediction 219 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1482g00006 Pral-Chr1482 58204 60918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1482g00006 54 187 MAP Kinase Kinase Kinase AT3G46920 40.741 2.51e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1482g00006 - - pcin:129311703 1091.64