LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1482g00006	ATGGAGGTTCCCTCCGCCGTTCAGCCCCTTTCATCCGCCCCACCGCCACAAACCCCTCATCTCAACTATCCCGAGTCCGTCGACTCCTCTCCTCGATCCCGGAACACTGATTCATGGGATGAGCCTGTCCCTCCGGCCGCCGCAGCCGCGGCCTCCTCCAAACTTCGGTTCATGTGCAGCTATGGTGGCCACATCGTCCCTCGTCCCCATGATAAGTCCCTCTGTTACGTTGGTGGGGAAACGCGTATCGTTGTTGTTGAACGTAACACCTCCCTTTCTGACCTTTCCTCTCGTCTCTCTAAAACCTTCCTCAACGGCCGTCCCTTTACTCTCAAGTACTTGCTTCCCACTGAAGACCTTGATTCTCTTATTTCTGTGACCACCGATGAAGACCTCGATAACATGATCGACGAGTACGATCGAATTTCTAATTCGTCACTGAAACCCTCTAGAATCCGCCTCTTCTTGTTCACGGCGAAGCCCGATTCGACCCAATCGATACCCATAATTAACAGCTCCGCTAAGTCAGAGGATTGGTTTCTGGGTATGCTTAATAGAGGGTTTTCGGATTCTGGTTCTGTTAATTTGTTGATGGGTTTTGATGATGAGCTTGGTGCGGGCAATCTGGATGGGGGTTCGAAAGATGTCGAGCCTGTGAGTTCTGGATCTTTTGGAAATGGCAAGAGTGCGAAGCAGCATGGTCAGGATGTTCACTCTGTGCCCGATTCACCTATGCTGGAAACCACATCTTCCTTTGGGTCCACTTCTTCATCGCCGTCGGTGGCGAATTTGCCGCCAATTCGGGTTCATATTGATGATGGTAGTGGTGGGGGAGCAAGGGTACAGGATCAGAAGGCGGTGGGGATTGAGGATCAGCTCGCTCAAATGGGTGTGGGTGGCGGACAGAAGCAAGATGAGGGTTTTCTGATGTCTTCACCTCCTACTATGCCGGCATCCACCGTCCCGGCCGGCGTGCCTGTTGGCTCCTCGGTCCCTCCCGGCGAATACCAGAATCGTGTTGTCTCTGATGATGAGAGATCAGACTATGGAGTCCTTGGGGGTTACAGGAAACCTCCCCCACCGCAGCCACAGACGGTGCCTCAGCCTCAGATTCTGCATACACAATTGCAGCAGAAGCCGACTGGAGGCGTTGATCTGCCTTCTCCAGATTCAGTTTCAAGTGACAGTAGTATGAAAAATGCAATGTCGCGCCCACAACCTATGGTCTATCAAGACCAAGCCCAGCTCCAAATTCCCTCAGGAGCTGCGAGGGTTCCTAGTAATCAGGTTGATCCGAAACTGATGTCTGATTCTCATGGTCGGATCCAAATGCAGCAACAAGTATTGGAGCAGGGATATGTTTTGCAACAACAATTTGATCATCATCAACAACAACAACAACAACCACCTCAACAGCAGCACCAATTTATACATGGAACACAGCAACAAGTACAGGAAGCAGGATATGTATTACAACCTCAATTTGATCAACAACAGCAACAATTTATACATGGCACACATTTCATTCACCATGCCCCTTCTGGTGCTGCGCCACTGTCTGCATTTTATCCTGTATATCCTTCCCAGCAGCAGATTCATCCCCAGCATCATCATCAGCTTGAACAGCAGTATCAGGTTTACTATGTTCCCAGCAGACAGACCCAACCTTACAACTTGTCTTCACAGCAGCCTAATATTAGTGAACCTCCTGCAACAATTCCTTCTAACCGCGCCCAGACAACACAGAATCCTGCTTTGGTTCAGCCATCTGCAGCTTATAACCCCATCAGAAATGCTCCGGTGCCTAAATCTGAAATGACAGCAGGTGCATATAGAACAGCATATTCGGCCACCCCTCAAGTGGTTCAAGTTGCTTCTGGTCAGCCTCAGCAGCAATTTGTTGCCTATTCCCAGTATCATCATCCATCTCAGGCTGCTGCCCCCAATTCTGCTGCCTCGGCTAGTTATGCTTACGAGTATGCAGATCCTGCTCACGCCCAGATATACTTCTCTCAGCCTCTGGCACCCACAATGCCTTCACAGTACCAAACTATGACGGGTGCTGCCGCTGCAGGACATCCAGATGTTTCTGCCCAGCCACCCTCAGACAGCATGAAGCAGCAGATAAGAACATCACAGCCACAGTAA	2148	0.5042	MEVPSAVQPLSSAPPPQTPHLNYPESVDSSPRSRNTDSWDEPVPPAAAAAASSKLRFMCSYGGHIVPRPHDKSLCYVGGETRIVVVERNTSLSDLSSRLSKTFLNGRPFTLKYLLPTEDLDSLISVTTDEDLDNMIDEYDRISNSSLKPSRIRLFLFTAKPDSTQSIPIINSSAKSEDWFLGMLNRGFSDSGSVNLLMGFDDELGAGNLDGGSKDVEPVSSGSFGNGKSAKQHGQDVHSVPDSPMLETTSSFGSTSSSPSVANLPPIRVHIDDGSGGGARVQDQKAVGIEDQLAQMGVGGGQKQDEGFLMSSPPTMPASTVPAGVPVGSSVPPGEYQNRVVSDDERSDYGVLGGYRKPPPPQPQTVPQPQILHTQLQQKPTGGVDLPSPDSVSSDSSMKNAMSRPQPMVYQDQAQLQIPSGAARVPSNQVDPKLMSDSHGRIQMQQQVLEQGYVLQQQFDHHQQQQQQPPQQQHQFIHGTQQQVQEAGYVLQPQFDQQQQQFIHGTHFIHHAPSGAAPLSAFYPVYPSQQQIHPQHHHQLEQQYQVYYVPSRQTQPYNLSSQQPNISEPPATIPSNRAQTTQNPALVQPSAAYNPIRNAPVPKSEMTAGAYRTAYSATPQVVQVASGQPQQQFVAYSQYHHPSQAAAPNSAASASYAYEYADPAHAQIYFSQPLAPTMPSQYQTMTGAAAAGHPDVSAQPPSDSMKQQIRTSQPQ	715

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1482g00006	715	CDD	PB1_UP2	58	157	-	-
	Pral1482g00006	715	MobiDBLite	consensus disorder prediction	459	480	-	-
	Pral1482g00006	715	MobiDBLite	consensus disorder prediction	242	263	-	-
	Pral1482g00006	715	SUPERFAMILY	CAD & PB1 domains	70	166	-	-
	Pral1482g00006	715	MobiDBLite	consensus disorder prediction	680	715	-	-
	Pral1482g00006	715	PANTHER	OS05G0427100 PROTEIN-RELATED	23	498	-	-
	Pral1482g00006	715	MobiDBLite	consensus disorder prediction	700	715	-	-
	Pral1482g00006	715	MobiDBLite	consensus disorder prediction	209	282	-	-
	Pral1482g00006	715	Pfam	PB1 domain	70	157	IPR000270	GO:0005515
	Pral1482g00006	715	ProSiteProfiles	PB1 domain profile.	54	157	IPR000270	GO:0005515

Showing 1 to 10 of 17 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1482g00006	Pral-Chr1482	58204	60918	Transposed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1482g00006	54	187	MAP Kinase Kinase Kinase	AT3G46920	40.741	2.51e-25	110

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1482g00006	-		-	pcin:129311703	1091.64

Showing 1 to 1 of 1 entries