Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1482g00005 ATGGTAGGGGACGGCTTCATAGTGAAAGGGATAACCATAGAGAACCCGGCAGGGCCCAGCAAGCACCAGGCGGTGGCCCTCAGAAACGGCGCCGACACCTCCGCCTTCTATCAATGCATCTTTGTGGGCTATGAAGACACCCTCTACGTCCGCTCCCTCCGTCAGTTAACGTTCTACCGTGAATGCGACATCTACTGCAACGTCGACTTCATCTTTGGCAACAACGCGACCTCCGTGCTCTGTAACCTGTACGCAGGAGACGGATTCATAGTGGAAGGGATAACCATAGAGAACCCGGCGGGGCCCAGCAAGCACCAGGTGGTGGCCCTCAGAAACGGCGCCGACACCTCTGCCTTCTTGTGA 363 0.5702 MVGDGFIVKGITIENPAGPSKHQAVALRNGADTSAFYQCIFVGYEDTLYVRSLRQLTFYRECDIYCNVDFIFGNNATSVLCNLYAGDGFIVEGITIENPAGPSKHQVVALRNGADTSAFL 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1482g00005 120 SUPERFAMILY Pectin lyase-like 84 119 IPR011050 -
Pral1482g00005 120 PANTHER PECTINESTERASE 85 119 - -
Pral1482g00005 120 Pfam Pectinesterase 2 80 IPR000070 GO:0030599|GO:0042545
Pral1482g00005 120 Pfam Pectinesterase 85 119 IPR000070 GO:0030599|GO:0042545
Pral1482g00005 120 SUPERFAMILY Pectin lyase-like 2 77 IPR011050 -
Pral1482g00005 120 Gene3D - 84 120 IPR012334 -
Pral1482g00005 120 Gene3D - 1 83 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1482g00005 Pral-Chr1482 37124 39863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1482g00005 86 119 Carbohydrate Esterase AT2G45220 61.765 5.22e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1482g00005 K01051 - cave:132170558 130.954