Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1478g00002 ATGTCTGGAGCTGAGGTACTATGGGAGAGATTAGTCCGGGCTGCGCTGAGGAGGGCAAGGATTGGTGACGATACATATGGACGGCCGGCTGTTGGAATTGCTGGAAACGTACCATCGGCACTTGCCAAAAACAGGGATATTGATGAGATATTAAGAGTTGCAGATGAAATTCAAGAGGAGGATCCTAATGTCTCCAGAATCTTATGTGAGCATGCTTACTCATTATCTCAGAATTTGGACCCTAACAGTGAAGGCCGAGGTGTTTTGCAATTTAAGACTGGTTTGATGTCTGTTATTAAGCAAAAGTTGGCTAAGAGAGAAGTTGGAACCATAGATAGAAGTCAGGACATTGCAAAATTACAAGAGTTCTACAAGCGCTATAGGGAGAAGCATAATGTAGACAGGTTACGGGAGGAGGAGATGAAGTTGCGGGAATCTGGTGCTTTTAGTGCAAAGCTTAGCGAGTTGGAGCGGAAGACATTGAAACGGAAAAGAATATTTGCTAGTTTAAGGGTTTTGGGCATGGTCATTGAACAGCTGTCCACCGAAATTCCTGAAGAGCTGAAATCTCTGATGGAATCAGATTCTGCAATGACAGAAGACCTAATTGCTTACAACATTATTCCCTTGGATGCTCCTTCCTTAACAAATACTATTATGTCTTTGCTTGAGGTTCAAGCAGCAGTTTCAGCTTTGAAGTACTATAGGGGTTTGCCGGAGTTACCTCGGGGTCATCCAATTCCTGCTGCTAGAGATGCTGATATGCTTGATTTTTTGCAGTGTATCTTTGGATTTCAGAAAGATAATGTCTCTAATCAGCGAGAACACTTAGTTCACCTGCTTGCTAATGAGCAGTCTCGGCTTGGAATTCCAGCTGAAACAGAACCTAAACTGGATGAGGCTGCGGTGCAGAACGTATTTGTGAAGTCCCTTGAGAATTACATTAACTGGTGTAGCTATTTAGCTATTCAGCCTGTTTGGAGCAGTTTGGATGCTGTTAGCAGAGAGAAGAAATTGCTATACGTCTCTTTAATTTACCTAATATGGGGTGAAGCTGCCAATATCAGGTTTAGGTTTCTGCGAGAATGCTTGTGCTACATATTTCACCATATTGCTATATCTTCTGCTTCTTCTTCTTCATGGATGGCTAGGGAAATGGATGAAATTGTGAGCAGCAAATTGCACAGCCAGCTAATAGTTGCATTACTCAGGATGGCGTTTCTTTTCTTGATCAAGTTATCTGCCTCTCTATGGCATTGTTGCTGCA 1267 0.4262 MSGAEVLWERLVRAALRRARIGDDTYGRPAVGIAGNVPSALAKNRDIDEILRVADEIQEEDPNVSRILCEHAYSLSQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREVGTIDRSQDIAKLQEFYKRYREKHNVDRLREEEMKLRESGAFSAKLSELERKTLKRKRIFASLRVLGMVIEQLSTEIPEELKSLMESDSAMTEDLIAYNIIPLDAPSLTNTIMSLLEVQAAVSALKYYRGLPELPRGHPIPAARDADMLDFLQCIFGFQKDNVSNQREHLVHLLANEQSRLGIPAETEPKLDEAAVQNVFVKSLENYINWCSYLAIQPVWSSLDAVSREKKLLYVSLIYLIWGEAANIRFRFLRECLCYIFHHIAISSASSSSWMAREMDEIVSSKLHSQLIVALLRMAFLFLIKLSASLWHCCC 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1478g00002 422 Gene3D - 31 190 IPR023175 -
Pral1478g00002 422 SMART FKS1_dom1_2 336 404 IPR026899 -
Pral1478g00002 422 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 338 390 IPR026899 -
Pral1478g00002 422 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 139 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1478g00002 Pral-Chr1478 26562 33796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1478g00002 1 394 Cell Wall Biosynthesis AT3G07160 70.051 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1478g00002 K11000 - ccaj:109815119 585.874