Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1470g00003 ATGTGTGGGGTGTCCAGCATATTATGCCTCCTTATGGTACCCCACCACATCCATATGTTGCAATGTATCCTCATGGTGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCAAATGGTATTGCCGATCCTTCAGGCAATACTCTTGGCAGCATGGAAGCTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCGATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACTGGAAGGAATGATAAACATAATAAAACACCAGGGGCATCTGCGAATGGAGTTCATTCAAAAAGTGGTGAAAGTGCAAGTGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTGAGAATGACTCACAGCTGAAATCAGAGGGCAGGCAGGACTCTTTGGGAGCTGAACCATCTCAAAATGGAGGTTCGGTACATGCTCCTCAAAATGGGGGACTTAACGTACCTCACAATATGGTCAATCAGACTATGAGTATCGTGCCTATCTCTGCTGCGGGTGCTCCTGGTGGTGTTTCTGGTCCCACGACAAACTTAAATATAGGAATGGACTATTGGGGTGCACCCACTTCATCCTCTATTCCTGCAATGCGAGGAAAGGTTCCTTCAACTGCCGTTGCTGGAGGAATGGTTACTGCTGGATCACGGGAGGGTGCTCAGTCACAACTTTGGCTGCAGGATGAAAGAGAGCTAAAGAGACAAAGACGGAAGCAATCTAACAGGGAATCAGCTCGCAGATCTAGACTGCGCAAGCAGGCGGAATGTGATGAACTAGCCCAGCGAGCTGAGGCTTTAAAAGAAGAGAATGCTTCTCTTCGCTCTGAAGTGAATCGGATAAGGAGTGAGTACGAACAACTGCTCTCAGAAAATGCTGCCCTCAAGGAAAAACTTGGGGAATTACCTGAGAATGAGGAACATAGGCCTACCCGGAATGACCAACACGTGGATAGTGACACTCAACAGGCTGAGCAGACGGAAGCCGTGCAGGGCAGTCGTTAA 1017 0.471 MCGVSSILCLLMVPHHIHMLQCILMVGSYPFSPFAMPSPNGIADPSGNTLGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITGRNDKHNKTPGASANGVHSKSGESASEGTSEGSDANSENDSQLKSEGRQDSLGAEPSQNGGSVHAPQNGGLNVPHNMVNQTMSIVPISAAGAPGGVSGPTTNLNIGMDYWGAPTSSSIPAMRGKVPSTAVAGGMVTAGSREGAQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVNRIRSEYEQLLSENAALKEKLGELPENEEHRPTRNDQHVDSDTQQAEQTEAVQGSR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1470g00003 338 PANTHER G-BOX-BINDING FACTOR 3-RELATED 29 327 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pral1470g00003 338 Pfam Disordered region downstream of MFMR 64 201 - -
Pral1470g00003 338 SMART brlzneu 234 298 IPR004827 GO:0003700|GO:0006355
Pral1470g00003 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 236 299 IPR004827 GO:0003700|GO:0006355
Pral1470g00003 338 Gene3D - 237 291 - -
Pral1470g00003 338 Pfam bZIP transcription factor 234 296 IPR004827 GO:0003700|GO:0006355
Pral1470g00003 338 SUPERFAMILY Leucine zipper domain 237 293 IPR046347 GO:0003700|GO:0006355
Pral1470g00003 338 MobiDBLite consensus disorder prediction 301 325 - -
Pral1470g00003 338 CDD bZIP_plant_GBF1 239 289 IPR045314 GO:0003700|GO:0006355
Pral1470g00003 338 MobiDBLite consensus disorder prediction 75 148 - -
Pral1470g00003 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 241 256 IPR004827 GO:0003700|GO:0006355
Pral1470g00003 338 MobiDBLite consensus disorder prediction 234 257 - -
Pral1470g00003 338 Coils Coil 254 302 - -
Pral1470g00003 338 MobiDBLite consensus disorder prediction 296 338 - -
Pral1470g00003 338 MobiDBLite consensus disorder prediction 42 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1470g00003 Pral-Chr1470 16161 20696 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1470g00003 1 332 bZIP Transcription Factor Family AT2G35530 56.305 5.47e-119 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral1470g00003 MFMR_assoc 8.3e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1470g00003 K09060 - gmx:778122 500.745