Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1466g00006 ATGGCTGGAGGTGTTTTTCAGCAGTTGTTGAGGAGAAGACTTCAGTCCCAACACGCTACACCGTCCCTTTTGTCATCCATCATCACAAATAAAGATAATGCAGGCTCTACTGGCACAAGTTCCTTGAGAGCACTTGCTTTATTTGGAGCTGGTGTCTCCGGATTTTTGAGCTTTGCAACAACTGCATCAGCGAGTGATGAGGCCGAGCATGGCCTGGAATGTCCAAGCTATCCATGGCCTCACAAGGGCATCCTCAGTTCATATGATCATGCTTCGATTCGCCGTGGTCATCAAGTTTATACGCAAGTCTGTGCTTCATGCCATTCTATGTCTTTGGTATCATACCGTGATTTGGTTGGTGTTGCCTATACAGAAGAAGAGGTAAAGGCTATGGCAGCTGAGATTGAGGTGGTTGACGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGTGATCGCTTTCCTCAACCATATGCAAATGAAGCAGCAGCTAGGTTTGCCAATGGAGGAGCTTATCCTCCAGATCTAAGTCTTATTACCAAAGCCCGCCACAATGGTCAAAACTATGTATTTTCCCTTCTTACTGGTTATCGTGATCCCCCTGCTGGTGTTTCGATTAGAGAGGGATTGCACTATAATCCTTATTTTCCTGGTGGAGCAATCGCCATGCCTAAAATGCTGAACGATGGTGCTGTTGAATATGAAGATGGCACCCCTGCTACAGAATCTCAGATGGGAAAAGACGTCGTGGCATTCTTGGCTTGGGCTGCTGAACCTGAGATGGAAGAGAGAAAACTGATGGGTTTCAAATGGATTTTTGTACTATCCCTGGCACTACTTCAAGCTGCCTATTTCCGTCGATTGAGATGGTCTGTTCTCAAGTCTCGCAAGCTGGTTGTTGATGTCGTCAACTAA 927 0.4639 MAGGVFQQLLRRRLQSQHATPSLLSSIITNKDNAGSTGTSSLRALALFGAGVSGFLSFATTASASDEAEHGLECPSYPWPHKGILSSYDHASIRRGHQVYTQVCASCHSMSLVSYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFSLLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMGKDVVAFLAWAAEPEMEERKLMGFKWIFVLSLALLQAAYFRRLRWSVLKSRKLVVDVVN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1466g00006 308 PRINTS Cytochrome C1 signature 97 116 IPR002326 GO:0009055|GO:0020037
Pral1466g00006 308 PRINTS Cytochrome C1 signature 142 162 IPR002326 GO:0009055|GO:0020037
Pral1466g00006 308 PRINTS Cytochrome C1 signature 224 243 IPR002326 GO:0009055|GO:0020037
Pral1466g00006 308 PRINTS Cytochrome C1 signature 263 278 IPR002326 GO:0009055|GO:0020037
Pral1466g00006 308 PRINTS Cytochrome C1 signature 77 96 IPR002326 GO:0009055|GO:0020037
Pral1466g00006 308 PRINTS Cytochrome C1 signature 213 224 IPR002326 GO:0009055|GO:0020037
Pral1466g00006 308 PRINTS Cytochrome C1 signature 244 263 IPR002326 GO:0009055|GO:0020037
Pral1466g00006 308 PRINTS Cytochrome C1 signature 175 199 IPR002326 GO:0009055|GO:0020037
Pral1466g00006 308 FunFam Cytochrome c1, heme protein, mitochondrial 264 308 - -
Pral1466g00006 308 Gene3D - 68 263 IPR036909 GO:0009055|GO:0020037
Pral1466g00006 308 ProSiteProfiles Cytochrome c family profile. 91 198 IPR009056 GO:0009055|GO:0020037
Pral1466g00006 308 PANTHER CYTOCHROME C1 32 305 IPR002326 GO:0009055|GO:0020037
Pral1466g00006 308 Gene3D - 264 307 - -
Pral1466g00006 308 FunFam Cytochrome c1, heme protein 68 263 - -
Pral1466g00006 308 Pfam Cytochrome C1 family 79 295 IPR002326 GO:0009055|GO:0020037
Pral1466g00006 308 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 263 307 IPR021157 -
Pral1466g00006 308 SUPERFAMILY Cytochrome c 72 262 IPR036909 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1466g00006 Pral-Chr1466 16773 21161 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1466g00006 1 308 Chloroplast and Mitochondria Gene Families AT3G27240 84.142 4.88e-179 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1466g00006 K00413 - qsu:111999908 556.214