Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1466g00004 ATGCCACAAGCTGATCCAATGAGACGTTTGCACATTTGTTTTCTGGTTCTTTTGTGGATTTTGTCTATTCCAAGTACCCATGAACTACAAGTTGCCCAGACCCAAGTCTTACTACAGATGAGGATGTATTTAGAGTATCCCGCCTCGTTGCAAAGTTGGGGAAGTTATAATGGGGACCTCTGTAACCTTTCTTCTTCTGCACATGTGAGCATTAAATGTCAAGATAACTCTGTATCTGAGCTTAAAATTAGGGGAGACAAAACTGCGAAGTCCGATGAGTTCAAGGGGTTTGCAATTCCCAATCAAACGCTGTCGACGAACTTCTCTATTGATTCTTTTATCACTGCATTAACGAGGTTGACCAGCTTAAGGGTTCTTAGCCTGGTGTCCTTGGGAATCTGGGGTCATCTTCCGGATAAGATTCACCGATTATCTCTGCTCGAAGTTCTGGACTTAAGCTCGAATTTCTTATTCGGTTCTATCCCGCCGAAAATTTCCACAATGGTACAGCTCAATACATTGAAAATCGATGACAATTATTTCAACGATTCAATGCCCGACTGGTTCGATTCATTGTCGAATCTAAATGTCTTGAGTTTGAAAACCAACACCTTGCGGGGTTCATTCCCCTCATCATTGTGCAAAATTAAGAACCTCACCGATATTTCTTTGTCTCGCAATGAGCTATCTGGTAAATTACCTGATTTGAGCGCTCTCACTGGCCTACGTGTACTGAATTTAAGAGAAAACCGTTTAGGTTCTAAACTGCCATTGATGCCCGCAGGAGTGGTCACAGTTCTGCTAAGTAATAACTCATTTTCTGGCGAGATACCGAAGCAGTTCAGTGAATTGGGTCGGCTTCAACATCTAGATCTCTCGGCAAATCATCTGAGTGGAATACCTCCATCTTTCTTGTTCTCATTGCCAAGCATCAGCTATTTGAATTTGGGTAGCAATGTGCTGAGCGGGTCACTTCCAGATAAACTAAGTTGTAGCAGCAAACTTGGTTTTGTGGACATTTCTAGTAACAAATTAATTGGTGAACTTCCTTCTTGCTTGGCCAATACGTCCAATAGAAGAGTTGTCAAATATGATGGAAATTGTTTAACTCTCGATTCTCAAGATCAGCAGCCAGGTTCTTATTGTGAAGAATCCAATACGGAGAGGAAGAAATCAATGGCGCGGAAAATAACGTTAGCAGGGGCCATCCTTATTGGACTTGTTCTTGTCCTTGGGATTTCGGTATTAGGAGTTTTCTTTTGTAGAAAATGTCTGAGGAGAAGGGCAGCTAAGCATCATTTGTTGCCAAAGAACGCGCAAGATAATTCCACTACAGGGTTTTCATCTCAATTCCTCGCAAATGCCAGGTTCATTTCTCAGGCAGTGAAGCTAGGGGCACAAGCTACATCAATCTGTCGACCAATTTCAGTTGAAGAATTGAGGGAAGCCACAAGAGACTTTGACTTGTCAGCTTTTATTAGTGAAGGCTCCTTAGGAAAGCTATACAAAGGAAAACTAGAGAATGGATCCTACGTGGCAATACGATCTTTAGTTCTGTCAGAGAAATGCTCAATTCAAAATCTTAAAGCTCGGTTGGATTTATTCTCAAAGCTTCAACATCCAAATTTGGTCAGCCTATTGGGTTATTGTATTGATAATAGTGAACAAGATGATTCAACCACCTACAAACTTCATCTTGTATATGAGTATGTGCTCAATGGGAGTTACCGAGCCTATCTGTCAGAGTTTTCTCTAGAGAAGCCGCTCAAGTGGTCTGATAGATTGGCAATTTTAATTGGGGTTGCCAAGGCTGTGCACTTTTTACATACTGGGGTTATTCCAGGTTGTTTTAACAACCGATTGAAGACAGACAATATTTTGCTTGATGAGCATCGCTTTCCCAAGTTAAGCGACTATGGAATGTCCATCCTCGGAGAAGAGATTGAAAGGTTTGAGGCAAAGAGACAGGACTCAAAATCATGCCAAAGGGCAGCATTTGAGGATGATGTTTATAACTTCGGGTTCATATTACTTGAATCACTTGTTGGACCTATAGCAAGCGGACAAGGGGAAGCGTTTTTTCTGAATGAGAAGGCATCCTTCGGAAGTCAAGATGGCAGAAGGAAAATTGTGGATCCCATAGTGTTGACATCTAGCTCTCAAGAGTCATTATCAATCGCAATAGCGATAACAACCAAATGCATATCTCCAGAACTTTCCTCTCGCCCCTCATTCGAGGATGTCCTGTGGAACTTACAGTATGCAGCTCAAGTGCAGGCCACAGCAGATGCAGACCAGAATTCAGAATCTACATCAGAATCTCAAGATTATAGGAGGGACAAATCCTGGGATTCAATTGGTTCACATCCTTCTCCGACAAAGCAGATTATTAAACCCCAGAATCATCGTAGGATCCATAAGTAA 2424 0.4187 MPQADPMRRLHICFLVLLWILSIPSTHELQVAQTQVLLQMRMYLEYPASLQSWGSYNGDLCNLSSSAHVSIKCQDNSVSELKIRGDKTAKSDEFKGFAIPNQTLSTNFSIDSFITALTRLTSLRVLSLVSLGIWGHLPDKIHRLSLLEVLDLSSNFLFGSIPPKISTMVQLNTLKIDDNYFNDSMPDWFDSLSNLNVLSLKTNTLRGSFPSSLCKIKNLTDISLSRNELSGKLPDLSALTGLRVLNLRENRLGSKLPLMPAGVVTVLLSNNSFSGEIPKQFSELGRLQHLDLSANHLSGIPPSFLFSLPSISYLNLGSNVLSGSLPDKLSCSSKLGFVDISSNKLIGELPSCLANTSNRRVVKYDGNCLTLDSQDQQPGSYCEESNTERKKSMARKITLAGAILIGLVLVLGISVLGVFFCRKCLRRRAAKHHLLPKNAQDNSTTGFSSQFLANARFISQAVKLGAQATSICRPISVEELREATRDFDLSAFISEGSLGKLYKGKLENGSYVAIRSLVLSEKCSIQNLKARLDLFSKLQHPNLVSLLGYCIDNSEQDDSTTYKLHLVYEYVLNGSYRAYLSEFSLEKPLKWSDRLAILIGVAKAVHFLHTGVIPGCFNNRLKTDNILLDEHRFPKLSDYGMSILGEEIERFEAKRQDSKSCQRAAFEDDVYNFGFILLESLVGPIASGQGEAFFLNEKASFGSQDGRRKIVDPIVLTSSSQESLSIAIAITTKCISPELSSRPSFEDVLWNLQYAAQVQATADADQNSESTSESQDYRRDKSWDSIGSHPSPTKQIIKPQNHRRIHK 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1466g00004 807 ProSiteProfiles Leucine-rich repeat profile. 218 240 IPR001611 GO:0005515
Pral1466g00004 807 MobiDBLite consensus disorder prediction 761 807 - -
Pral1466g00004 807 ProSiteProfiles Leucine-rich repeat profile. 286 307 IPR001611 GO:0005515
Pral1466g00004 807 Pfam Leucine rich repeat 286 345 IPR001611 GO:0005515
Pral1466g00004 807 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Pral1466g00004 807 SUPERFAMILY Protein kinase-like (PK-like) 470 752 IPR011009 -
Pral1466g00004 807 Gene3D Ribonuclease Inhibitor 30 261 IPR032675 -
Pral1466g00004 807 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 570 - -
Pral1466g00004 807 SUPERFAMILY L domain-like 105 370 - -
Pral1466g00004 807 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 30 261 - -
Pral1466g00004 807 Gene3D Phosphorylase Kinase; domain 1 450 570 - -
Pral1466g00004 807 Gene3D Transferase(Phosphotransferase) domain 1 572 781 - -
Pral1466g00004 807 ProSiteProfiles Protein kinase domain profile. 487 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1466g00004 807 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 104 753 - -
Pral1466g00004 807 SMART LRR_typ_2 239 262 IPR003591 -
Pral1466g00004 807 SMART LRR_typ_2 284 307 IPR003591 -
Pral1466g00004 807 SMART LRR_typ_2 308 332 IPR003591 -
Pral1466g00004 807 SMART LRR_typ_2 144 168 IPR003591 -
Pral1466g00004 807 Gene3D Ribonuclease Inhibitor 262 398 IPR032675 -
Pral1466g00004 807 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 263 387 - -
Pral1466g00004 807 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 571 771 - -
Pral1466g00004 807 Pfam Protein tyrosine and serine/threonine kinase 491 681 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1466g00004 Pral-Chr1466 9157 13446 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1466g00004 7 700 Miscellaneous Gene Families AT5G14210 57.610 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pral1466g00004 PK_Tyr_Ser-Thr 3.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1466g00004 - - gmx:100813412 1045.42