Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1464g00005 ATGTCTCAAATAGGTTCCATTAAGCTGCTAGCATTATGGTGTATTCTCTGCATATTCTCCGGTTCTGCTGCTGCTCAAGATAACGAAGCAAAAGCTCTGTTGAACTGGAAAGCCAGATTAAATAAGAAAAGCAAAGCCACCTTGTCCTCTTGGAACAATGAAACCAATCCTTGCAGACACAACTGGAAGGGAATTTCATGTGACGAATCCATGTCCGTGATCAAGATAAGTCTGTCAAATCTCAGCCTACAAGGTACTCTTGACAGTCTCAACTTCACTTCCTTTCCTAATCTGCGACATTTTGATCTGAGTTTGAACCAATTTTATGGAAGCATTCCCCATAAAATTGGTAACTTGTGCAGTATTTTGGTATTGAAATTGGCGGATAATTTATTTAGTGGTCCCATCCCTCCTGAAATCCAGAAACTAACCACCCTCAATATTCTTGACCTTAGTACATGTCACCTGGGAGGGCCAATTCCGCATGAAATTGGCCATTTGAGGAATCTGACATTCCTCTGGCTTGGAGAGACCTCTCTTTCTGGTCCCATTCCAGAAGAGATTGGAATGTTAAGTAATCTTTTGAGCCTTTACTTGGCAAACAACTCTGTGTCAGGGAGAATGCCAGCATCGCTCGGAAACCTGACCAAGTTACAAGAAATTTTTCTTTATGACAACAATCTCTCGGGTCCTATTCCTAATGGTTTCTGGAAACCCTATTCTCTCACTAGCATTAATTTGTATTCTAATAGACTTTCCGGGCCAATCTCTCCCTTTATTGGAAACCTAACAAATCTCATATATTTGGGCTTGAATGACAACAACTTTTGTGGTCCAATTCCTTCATCCATTGGTAACTTGATCAATTTACATCAGGTCGCTCTTCACAACAACAGCCTTTCAGGATCTGTTCCTTCCACTATAGGAAATATGACAAAGCTTACCCACCTGTTTTTGGATAGCAATAGTCTCAATGGTCAACTTCCACAAGAAATGAATAATTTGACACTTTGGCAGAACTTACAACTCAGTTATAATCATTTCATTGGCCCTCTGCCACAACAAATTTGTCAAAGTGGAAGGTTATTTAGGTTTGCTGCAAATAATAACCATTTCACTGGTCCTATTCCAACAAGTTTGAAGAATTGTTCCAGTCTAGAAAGACTCAGACTTGATAATAACCAAATAGTCGATGATATAACAGCTGCTTTTGGAGTATATCCTTATTTGGACTACATTGATCTTAGTGGTAATCAAATCTATGGCCACCTTTCATCCAAGTGGGGGAAGTGTCAAAATCTCACACAATTGATTGTTCACAATAACAAGCTTTCTGGTGATATACCACCGGAACTAGGAGAGGCATCTAAACTTGGTTCACTTAACTTGTCTTCGAATCATTTGTCTGGGCAAATTCCAAAACAGCTAGGGAAGTTGATCATGTTGATTGAACTCTCTTTAAGTAACAATAACTTCTCTGGTAATGTCCTCTCATCTATAGGATCACTTAGTCAGCTTGAAACTTTGGAGTTGCCGGCAAATAATTTCAATGGCTCCATCACAAGAGAGTTTGGGAAACTAAAAAGGTTAGTGGCCTTGAACTTGAGCAAAAACAAATTTGATGAAAGCATTCCCCATGAGCTTCATGAACTCCAAGACCTTGAACAACTTGATCTCAGTGACAACTTGCTAATCGGAACAATACCAGAAACACTTGGATTGCTACCCAAGTTGCAAGTATTGAATCTCTCACATAATAATCTCTCTGGCACCATTTCTTCTAGTTTTAGTAAAATGCCTGCTTTGTCTATTGTTGACATATCATACAATCAATTAGAAGGCCCTGTTCCAAATGATTTGACCTTTTATAATTTTCAGGCATTGAGGAATAATAAAGGTTTGTGTGGTAATGTTACTGGTTTAGTTCCTTGTGGGGATTCCCAAACAAATAGACACGATCACAGGAGTAAAATGTTCTTGAAGATAGTCCTCCCATTGGCCACACTACCTATGATAGCTGTTGGAGCATATTTCATATTTTTCAAAATAACAACAAAAGCAAAAAACAAAATTGGAGAAGCTCCACCAGAAGATGCTTATTTGTTATTGACTGGTGGTAGAAAAATATTGCATGATGATGTCATTAATGCCACAAACAAATTTGATGAAAGATATTTGGTCGGGGAAGGGAGCCAAGGAAGTGTTTATAGGGCTGAGTTGTCTACAGGTGATGTTTTTGCTGTAAAGAAACTTCATTCATTGGCAAGTGATGAAATCACCAACCATAAAGCTTTTGCAATTGAGATTCAAGTTTTGAGAGAAATCAAACATCGCAACGTTGTGAAGTTGCATGGGTTTTATTCCAATTCACGATTCTCCATTTTGGTTTATGAGTTTGTGGAAGGTGAAAGCTTGGATAAAATATTAGGGGATGAGAAAAAGGCCACTGAGTTTGGATGGAACAAAAGGGTGAACGTTGTTAAAGGTGTGGCTAATGCTTTATTCCATATGCATCATGGCTGTTTGATTCCTATCATCCATCGTGACATATCAGGCAAGAATGTTCTTTTGAGTTCTTCTGACTATGGAAAAGCATGCATCATTGACTTTGGAACGGCAAGGTTTTTGAATCCGAACTCAAGCAATATGACTACATTTGCCGGCACACCTGGATATGCTTCACCAGAGATGACTTTTCCTTTGGAAGCGAATGACAAATTTGATGTTTATAGCTTTGGAGTTTTGAGTTTGGAAGTCATTATGGGGAGACATCCAGGAGAGCTTATTTCATCTTTGCAAGAGAAATCAACTACCATTGATGATTTGAGGTTAAATGATGTCTTGGACTCGCGACTTTCTCTACCCACAAAATCAGGTGATGAGGTTATCATGGTGCTAAAAATAGCAATTTCTTGCTTGAATAAGAATCCTAGATCTCGTCCAACAATGAAACAAGTATCTACGAAGCTTGAGACGGCACCAAAATCTTATTCAAAGGATCAATTTCCCATCACTGCAATTGGACAACTCATGAGGGACGGAACTTCTTCGTAA 3054 0.3883 MSQIGSIKLLALWCILCIFSGSAAAQDNEAKALLNWKARLNKKSKATLSSWNNETNPCRHNWKGISCDESMSVIKISLSNLSLQGTLDSLNFTSFPNLRHFDLSLNQFYGSIPHKIGNLCSILVLKLADNLFSGPIPPEIQKLTTLNILDLSTCHLGGPIPHEIGHLRNLTFLWLGETSLSGPIPEEIGMLSNLLSLYLANNSVSGRMPASLGNLTKLQEIFLYDNNLSGPIPNGFWKPYSLTSINLYSNRLSGPISPFIGNLTNLIYLGLNDNNFCGPIPSSIGNLINLHQVALHNNSLSGSVPSTIGNMTKLTHLFLDSNSLNGQLPQEMNNLTLWQNLQLSYNHFIGPLPQQICQSGRLFRFAANNNHFTGPIPTSLKNCSSLERLRLDNNQIVDDITAAFGVYPYLDYIDLSGNQIYGHLSSKWGKCQNLTQLIVHNNKLSGDIPPELGEASKLGSLNLSSNHLSGQIPKQLGKLIMLIELSLSNNNFSGNVLSSIGSLSQLETLELPANNFNGSITREFGKLKRLVALNLSKNKFDESIPHELHELQDLEQLDLSDNLLIGTIPETLGLLPKLQVLNLSHNNLSGTISSSFSKMPALSIVDISYNQLEGPVPNDLTFYNFQALRNNKGLCGNVTGLVPCGDSQTNRHDHRSKMFLKIVLPLATLPMIAVGAYFIFFKITTKAKNKIGEAPPEDAYLLLTGGRKILHDDVINATNKFDERYLVGEGSQGSVYRAELSTGDVFAVKKLHSLASDEITNHKAFAIEIQVLREIKHRNVVKLHGFYSNSRFSILVYEFVEGESLDKILGDEKKATEFGWNKRVNVVKGVANALFHMHHGCLIPIIHRDISGKNVLLSSSDYGKACIIDFGTARFLNPNSSNMTTFAGTPGYASPEMTFPLEANDKFDVYSFGVLSLEVIMGRHPGELISSLQEKSTTIDDLRLNDVLDSRLSLPTKSGDEVIMVLKIAISCLNKNPRSRPTMKQVSTKLETAPKSYSKDQFPITAIGQLMRDGTSS 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1464g00005 1017 FunFam Nuclear pore complex protein NUP107 26 185 - -
Pral1464g00005 1017 PRINTS Leucine-rich repeat signature 575 588 - -
Pral1464g00005 1017 PRINTS Leucine-rich repeat signature 554 567 - -
Pral1464g00005 1017 Gene3D Ribonuclease Inhibitor 240 309 IPR032675 -
Pral1464g00005 1017 Gene3D Ribonuclease Inhibitor 182 239 IPR032675 -
Pral1464g00005 1017 SUPERFAMILY RNI-like 294 630 - -
Pral1464g00005 1017 SUPERFAMILY Protein kinase-like (PK-like) 705 990 IPR011009 -
Pral1464g00005 1017 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 335 648 - -
Pral1464g00005 1017 FunFam Leucine-rich repeat receptor protein kinase MSP1 685 799 - -
Pral1464g00005 1017 Pfam Leucine rich repeat 505 564 IPR001611 GO:0005515
Pral1464g00005 1017 Pfam Leucine rich repeat 573 612 IPR001611 GO:0005515
Pral1464g00005 1017 Gene3D Ribonuclease Inhibitor 25 181 IPR032675 -
Pral1464g00005 1017 FunFam Leucine-rich receptor-like protein kinase family protein 232 330 - -
Pral1464g00005 1017 Pfam Protein kinase domain 725 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1464g00005 1017 Gene3D Transferase(Phosphotransferase) domain 1 801 1006 - -
Pral1464g00005 1017 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 295 991 - -
Pral1464g00005 1017 Gene3D Phosphorylase Kinase; domain 1 684 799 - -
Pral1464g00005 1017 SUPERFAMILY L domain-like 47 350 - -
Pral1464g00005 1017 ProSiteProfiles Protein kinase domain profile. 721 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1464g00005 1017 SMART LRR_typ_2 191 214 IPR003591 -
Pral1464g00005 1017 SMART LRR_typ_2 527 549 IPR003591 -
Pral1464g00005 1017 SMART LRR_typ_2 551 574 IPR003591 -
Pral1464g00005 1017 SMART LRR_typ_2 215 239 IPR003591 -
Pral1464g00005 1017 SMART LRR_typ_2 575 598 IPR003591 -
Pral1464g00005 1017 SMART LRR_typ_2 95 119 IPR003591 -
Pral1464g00005 1017 SMART LRR_typ_2 311 335 IPR003591 -
Pral1464g00005 1017 SMART LRR_typ_2 287 310 IPR003591 -
Pral1464g00005 1017 Gene3D Ribonuclease Inhibitor 310 644 IPR032675 -
Pral1464g00005 1017 Pfam Leucine rich repeat N-terminal domain 27 68 IPR013210 -
Pral1464g00005 1017 ProSiteProfiles Leucine-rich repeat profile. 577 598 IPR001611 GO:0005515
Pral1464g00005 1017 ProSitePatterns Tyrosine protein kinases specific active-site signature. 845 857 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1464g00005 Pral-Chr1464 111523 114911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1464g00005 17 902 Receptor kinase-like Gene Family AT4G08850 40.260 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral1464g00005 Pkinase 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1464g00005 - - pcin:129295243 1177.93