Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1464g00004 ATGTCTGAAAGAGATTCCACTAAGCTGCTAGCATTATTCTTCTGTGTTGCTTCCTTTGCATCTGTTGTTGCTGGAGATAGCAAAGCAGAAGCTCTGTTAAATTGGAGAGATGGCTTTAACGACCAAAGCAAAGCTACCTTGTCCTCTTGGAAGAATGGTACTAATCCCTGCGGACAATCCTGGAGGGGAATTTCCTGTGATAAATCCATGTCTGTGATCAAGATAAGGCTGTCAAATCTTGGCCTTCAAGGTACACTTTCCAGTCTCGACTTCGCTGCCTTTCCTAATCTCCTCTACTTCGAAATAAATTCCAACCGATTTCATGGAAACATTCCACACGAAATTGGTAATTTTTCCAGTATTTTGATGTTGAGTTTGGCAGATAATCCAATTAAGGGTCCCATTCCTCCTGAAATCTGGAATCTAACCGCTTTAAATATTCTTGATCTTAGTTCATGTAATCTCACAGGACGAATTCCCTATGAAATTGGGAATTTGAGGAAGTTGAATCTCTTATTGCTTGGACAAAATTCCTTTTCCGGTCCCATTCCTGAAGAGATTGGAATGTTGAGCCATCTCTTAGAGCTTGATTTAGGAGGAAATTCTCTGTCAGGGAGAATCCCATCATCAATTGGAAACTTGACCATGTTACAAAATCTTTATCTTTTTGGGAACAATCTTGAGGGTCCTATTCCTAATGAATTTTGGAAACTCTATTCTCTCATTAACATTCATTTAAGTTATAATAGATTCTCTGGGGCAATCTCTCCCTCCATAGGAAACCTAACAAATCTCGAAAAATTGTTCTTTTTTAAGAACAGATTTTTCGGTCCAATTCCTGCATCCATTGGTAACTTAATCAATGTATATGATGTCGCCCTTCAAAGCAATAGTCTTTCAGGATTTATTCCTTCCACTATTGGAAACATGACAAAGCTCACCTCCTTGTGCCTAGACAGCAACAATTTCAGTGGTCAACTTCCACAAGAAATGAATAACTTGACAAGTTGTTATACCATACAACTGAGTTATAATCATTTCAATGGTCCTTTGCCACAAAATATCTGTCAAGGTGGGATGTTGGTTAAGTTTACTGCTAATGATAACCATTTCACTGGTCCTATTCCAAGAAGTTTGAAGGATTGTTCTAGTCTAGAAAGATTAAGGCTTGATAATAACCAAATAGCAGATAATATAACAGTTGCTTTTGGGATATATCCTTATTTGTACTACATCGATCTAAGTGGAAATCAATTATATGGCCACCTTTCGTCCAAGTGGGGGAAGTGTCAAAATCTCACACAATTGATTATTCACAATAACAAGCTTTCTGGTGATATACCACCAGAACTAAAAGGGGCAACTAAACTTGGTTTACTTAACTTGTCTTCAAATCACTTCTCTGGAAAAATTCCAAATGAACTAGGGAAGTTGACCAAATTGATGAAACTCTCTTTGAGTGACAATAACTTCTTTGGTAATGTCCCCTCAGGTATAAGATCACTTAGTCAACTTGAAATTTTGGAGTTAGCAGCAAATAATTTAACTGGTTCAATCACAAGCGAGCTTAGGGAATTGAAAAGCTTAAGGGTCTTGAACTTGAGCAAAAACAAATTTGATGAAAGCATTCCCCCTGAGTTTGGCGAGATCCTAAAACTTGAACAACTTGATCTTAGTGACAATTTGCTAATTGGAACAATACCATTGAGGCTTGGAATGTTACCTAACTTGCAAGTTTTGAATCTCTCACACAATAATCTCACTGGCACCATTCCTTCCGGCTTTAGTGGATCAATGTCAGCTCTGTCTATAGTTGACATATCATACAATCAATTAGAAGGCCCTATTCCAATCAAACCTGCCTTTCACAACATTGATGCATTAAGGAATAACAAAGGCTTGTGCGGTAATGTCACTGGTTTAAGTCCCTGTACAAAAAGCAAAGATGGAGAAAGTGCACCAGAAGATGTTTATTTTGTATGGAGTCTTAAAAGAGAAATATTGTATGAAGACATCATTGAAGCCACAAAGGAATTTGATGAAAGATATCTCATTGGGAAAGGGGGCCAAGGAAGTGTTTATAAGGCTAAGTTGCCTACAGGAGACATTATTGCAGTAAAGAAGCTTCATTCAATGCCAAGTGGGGAAATCTCCAACCAAAAAGCTTTCACAAGTGAGATCCAAGCTTTGACAGAAATCAAACATCGTAACATTGTGAAGTTGTATGGGTTTTATTCCAATTCACAATTCTCTATTTTGGTTTATGAGTTCTTGGAAGGTGGCAGCTTGGACCACATATTAAAAAATGAGGAACAAGCCATTGTGTTTGACTGGAAAAAGAGGGTGAATGTTGTCAAAGGCGTGGCTAATGGTTTATTCCATATGCATCATGGTTGTTCAATTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAAGTTCTGATTATGAAGAAGCTCGGATCATTGACTTTGGAACGGCAAAATTTTTGAGTCCTAACTCAAACAATATCACCACATTTGCTGGCACATTTGGGTATGCTGCACCAGCCAATGAGAAATGTGATGTATATAGCTTTGGAGTGTTGACTTTAGAAATCATTATGGGTGCACATCCCGCAGAGCTCATTTCATTTTTGGCGGAGAATTCAACCAATAATGATTTGTTGTTAAGGGATGTGTTAGACCCACGAATTTCTCCACTCACAAAACCAATCCTAGATGATGTGATCTTAGTTGCAAAAATAGCTTTTTGTTGCGTGAATGAGACTCCTCAATCTCGTCCAACGATGGAACAAGCATCTACGGAGCTAGCAAGGACACCAAAACACTATTCAGAGGATCAATTTCACACCATCACAATTGGACAACTAATGAGGGATTGA 2892 0.3811 MSERDSTKLLALFFCVASFASVVAGDSKAEALLNWRDGFNDQSKATLSSWKNGTNPCGQSWRGISCDKSMSVIKIRLSNLGLQGTLSSLDFAAFPNLLYFEINSNRFHGNIPHEIGNFSSILMLSLADNPIKGPIPPEIWNLTALNILDLSSCNLTGRIPYEIGNLRKLNLLLLGQNSFSGPIPEEIGMLSHLLELDLGGNSLSGRIPSSIGNLTMLQNLYLFGNNLEGPIPNEFWKLYSLINIHLSYNRFSGAISPSIGNLTNLEKLFFFKNRFFGPIPASIGNLINVYDVALQSNSLSGFIPSTIGNMTKLTSLCLDSNNFSGQLPQEMNNLTSCYTIQLSYNHFNGPLPQNICQGGMLVKFTANDNHFTGPIPRSLKDCSSLERLRLDNNQIADNITVAFGIYPYLYYIDLSGNQLYGHLSSKWGKCQNLTQLIIHNNKLSGDIPPELKGATKLGLLNLSSNHFSGKIPNELGKLTKLMKLSLSDNNFFGNVPSGIRSLSQLEILELAANNLTGSITSELRELKSLRVLNLSKNKFDESIPPEFGEILKLEQLDLSDNLLIGTIPLRLGMLPNLQVLNLSHNNLTGTIPSGFSGSMSALSIVDISYNQLEGPIPIKPAFHNIDALRNNKGLCGNVTGLSPCTKSKDGESAPEDVYFVWSLKREILYEDIIEATKEFDERYLIGKGGQGSVYKAKLPTGDIIAVKKLHSMPSGEISNQKAFTSEIQALTEIKHRNIVKLYGFYSNSQFSILVYEFLEGGSLDHILKNEEQAIVFDWKKRVNVVKGVANGLFHMHHGCSIPIVHRDISSKNVLLSSDYEEARIIDFGTAKFLSPNSNNITTFAGTFGYAAPANEKCDVYSFGVLTLEIIMGAHPAELISFLAENSTNNDLLLRDVLDPRISPLTKPILDDVILVAKIAFCCVNETPQSRPTMEQASTELARTPKHYSEDQFHTITIGQLMRD 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1464g00004 963 Pfam Protein kinase domain 683 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1464g00004 963 SUPERFAMILY L domain-like 30 288 - -
Pral1464g00004 963 SUPERFAMILY RNI-like 293 614 - -
Pral1464g00004 963 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Pral1464g00004 963 Pfam Leucine Rich repeats (2 copies) 575 612 IPR025875 -
Pral1464g00004 963 FunFam Leucine-rich receptor-like protein kinase family protein 231 329 - -
Pral1464g00004 963 Gene3D Transferase(Phosphotransferase) domain 1 758 957 - -
Pral1464g00004 963 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Pral1464g00004 963 FunFam Leucine-rich repeat receptor protein kinase MSP1 643 757 - -
Pral1464g00004 963 ProSitePatterns Tyrosine protein kinases specific active-site signature. 803 815 IPR008266 GO:0004672|GO:0006468
Pral1464g00004 963 Pfam Leucine Rich Repeat 193 214 IPR001611 GO:0005515
Pral1464g00004 963 SMART LRR_typ_2 310 334 IPR003591 -
Pral1464g00004 963 SMART LRR_typ_2 190 214 IPR003591 -
Pral1464g00004 963 SMART LRR_typ_2 142 166 IPR003591 -
Pral1464g00004 963 SMART LRR_typ_2 574 597 IPR003591 -
Pral1464g00004 963 SMART LRR_typ_2 478 502 IPR003591 -
Pral1464g00004 963 SMART LRR_typ_2 526 549 IPR003591 -
Pral1464g00004 963 FunFam Nuclear pore complex protein NUP107 25 183 - -
Pral1464g00004 963 PANTHER LEUCINE RICH REPEAT KINASE 2 258 943 - -
Pral1464g00004 963 SUPERFAMILY Protein kinase-like (PK-like) 658 938 IPR011009 -
Pral1464g00004 963 Pfam Leucine rich repeat 480 539 IPR001611 GO:0005515
Pral1464g00004 963 Gene3D Ribonuclease Inhibitor 310 646 IPR032675 -
Pral1464g00004 963 Gene3D Phosphorylase Kinase; domain 1 647 757 - -
Pral1464g00004 963 ProSiteProfiles Protein kinase domain profile. 679 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1464g00004 963 PRINTS Leucine-rich repeat signature 574 587 - -
Pral1464g00004 963 PRINTS Leucine-rich repeat signature 553 566 - -
Pral1464g00004 963 Gene3D Ribonuclease Inhibitor 184 238 IPR032675 -
Pral1464g00004 963 Gene3D Ribonuclease Inhibitor 239 309 IPR032675 -
Pral1464g00004 963 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 334 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1464g00004 Pral-Chr1464 60398 63521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1464g00004 4 853 Receptor kinase-like Gene Family AT4G08850 41.720 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral1464g00004 Pkinase 2.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1464g00004 - - pcin:129295243 1141.33